Gene detail

Detailed information of ctg865-2.17-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg865-2.17-1	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	chr4	112613023	112618405	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg865-2.17-1

ATGCCGCCGTTACCGTCCGCGGATCGGCGCGTTTTAGTGGAGAGTATGATTGCCGAGTTTCTCGACAAAGGGGCCATCCAGAGAGTCAGTCTGGACACTCCGGGATTTTATTCTCATCTTTTCTTCGCCCGGAAGAAAAATGGGGAATGGAGACCAATCCTAAATTTGAAGCCACTGAACGTCTACGTCGATGTTCCTTCCATGAAAATGGAAACGGTTCATTCGGTCCGGAACCTGCTTCAAATTGGGGAGTGGGCTGTGTCGATCGATCTGAAAGACGCATACCTCCATGTCCCGGTGCACAAGGCGTTTTGGAAGTTTCTGCGCTTCCTGTTCGACGGGAAAGCGTACGAGTTTCGTGTGCTTCCGTTCGGTTTGGCGACGAGTCCCCATGCTTTTACACGTGTGGTAAAAGCGGTGGTAGGTCATGTTCATTTGTTAGGGGTTCGAATGCATACCTATCTGGACGATTGGTTGATCCCAGCTTCGTCGCAACAGGAGTGTCAGACCAATGTCGGGTTGGTTTTGGACACGATCCTCCAATTGGGTTTTATTCCCAATTGGGTGAAATCGGAGTTAACGCCGGCTCAGATTTTCACATATCTCGGAGTGGTCTTCGATCTTGTGGTAGCGTCGGTTCGTCCCACCGATGCGCGTATCCACAATTTCCAAACGTCGGCGCGACGTTTGATGGGGGAGCAAAGTACTACGGTACGATCTCTCCACGTGGTGTTGGGCCACCTCGAATCTCTGGCCTCATTGATCGTGCGGTTCAGACGATTCAAACGACCACTCCAGTGGCATTTGTCCCCACGGTGGGACGGTCACAATTGGGACACGATAGTGCCTCTGGGCCCATGGTTCACTCATCCGATACAGGAGTGCCTGTCGGACAAGTGCATGTCCCTATCGGTTCCGTTGCACCCCCCTGCTCCGGATCTGATCCTGTTCACGGATGCGTCGCTGCACGGGTACGGGGCGCATCTGTTGGATCAACACATTTCAGGGGTATGGAATCTCTCCGAGAGGAAGCTTCATATCAACTGTTTGGAGATGGAGGCAGTGCATCGTGCCTGTCTTCATTTCCGGTGTGTTCTTCGACACCGTCGAATTCTGTTGAGATGCGACAATACGTCGGTAGTGGCATATCTCAATCGTTGGGGTGGAACCAAATCGGAGACTTTGGGTCGCAAAGCTCTTGCGATTTTGGAATTCTGCGACCAACTAGGGACCACTCTGTGGGCGAAACACATTCCTTCATCGGTGAATGTGTTAGCAGATGCCCTCAGTCGACATACCCCTGTTCAGACGGAGTGGATGTTGAACAAAGGGGTGGTCGCAGCGGTTCTTCGGGTGTGGGGCAGTCCACAGGTGGACATGTTTGCCACACGGTTGAACAACCAATTGCCGGTGTTCGTGTCCCCGGTACCGGACACATTGGCGTTGGAGTACGACGCGTTAAGTATGGATTGGACGGGACTGGATTTTTATGCCTTCCCTCCTCCTGTCTTACTCGGCAAGGTGTTGACCAAAGTGGTCCAGGAACCTTGTCACGTGACGTTGATAGCTCCTCTGTGGGTGGCGCAGCCCTGGTTTCCACAGCTCCTGTCACTGTTAGTGGCAGTCCCATTCCGATTACCAGTGTTGTCCGATCTACTCAGCCAGCGACTGAGTCAGACGGTGTGGCATCCGAAGCCGGAGGTCTTCCGGTTTCACGCGTGGAGGTTATCAGGGCTTCCTTGCGACGCAGAGCTGTACTGCCACCCTGACGAAGTGTGTCGGATTTACCCTCAGTGGTGTAAGAAACCACCGTGTCCTAGGAAACCAACGTGCATCTATCCACGTAGCAAGCCTGGATATTGCCCCATGACCATAATACCGTTTCCCGGAATGTTTGGACCTAAATGTGACTTTGACTACGATTGTCCGGGCAGGATGGTGTGCTGCGGACACCCGGAGAGCCGGTGCATCATACCGTACAAGTCCTCTGGGCAGTGTCCGCGGAGTGAGCCGACCACCAAGTGCGGCCCGCGGTGTACGGACGACTTCGACTGCGGTAGAGGACTGATCTGCTGTAACTTCAAGCAGTGTGTCGGTAAAGTCTGCTCCTGGCCCAGGGTACTCGACCGCAAGGAGATGGCCGACTTCATTTAGACACTCACAGCGCCACCTGGTTGTCGGCGCATGTCAGATATTAAACGTACTACACACTTTGTATCACTACGTCTGTTATCGGTATTAAATATGAACAAGCAATTAAACAGTATTGGTGA

Transcript

ctg865-2.17-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00095	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036645	Homologous_superfamily	Elafin-like superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052055	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33050	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg865-2.17-1 global RNA-seq network