Gene detail

Detailed information of ctg803-3.9-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg803-3.9-1	-	chr13	16572389	16588602	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg803-3.9-1

ATGACCAAGAAACCTATGACCGATACAACAGAAAGCATGACTTCAGAAAGTCAGTCGTCGGAGAATCTTCGACAGTATCTGACTGATAATGGAGATGGCCACCAGATTCTGTCGATTCCCGAGGGCACCTATAAAGGCTGGATCCCACGGATTTTGTATACGTTTGAGCTCGACGAGTTACGTTTGCCTTTCTTAAAGCTGCTTTCGTTTCCCGTGGGTGGGACTGCGCTCGGTACACTGACCAAAATGAAACTGTTCGAAGCAGTTGGAAATTACCTGCACCGGCTGCCGGTATCCTTTGCAGAGTGCACACAACTGGCTTACCTAAATCTCGAATTTAACCACTTCACTGCCATTCCTGCATCCATTTTCGAGCTGGTTAATTTAGAAGTTTTACTGCTTGGGGATAACGAAATCGAGGAGATACCCTTGGAGATAGGTAATCTCGTGAATCTTCGTGTCCTTAATCTCGGTGGAAACTGCCTTACGAATATCCCTGAGGAACTTGCGCAGTGTAAGAAAATACACCATTTAAATCTGTGTGGGAAATTGTATCCGCGAGCTGGACTGCAGACTGTTCCAAAGGGTGTGTGCGGTCTGGGCGAACTTGTTGACTTGGATCTAAGTTGGCAGTCAATACAGACGATTCCCGATGGATTTGGCTATTTACGCAAGCTCGAGAGTCTGAATCTGAAAGGAAATCATTTGGTCTATGTATCGATGTTCATTCAGTACTGCAAGAAACTCGAAACCGTGAACCTGACCGGAGCTCTCCGATACTGCTCCATGGTTCCGGAAGCCATTTTCATGTTGGAGGGTCTGAAGAATTTAAATCTGACGGGAAATTTTTTCACGGAAATTCCATCGGAAGTTTGTGGGTTAAGGAAGCTGAGGAAACTTTCCATCCAGCGAAACGCGTTACTCCGTCTCCCAGAAGAACTTTTCAGTCTTGAGCATCTAGAGTATTTGGAATTAGGCGAGAATTATCTGGAGACGATTCCCAATGGAATATCCAAGCTGAAAAATTTAACTTATCTCAACTTAGAACAGAATCAGATGTCATCCATCCACGAAGACATCTGTAACTGTCGCAGCTTGCAGAGCCTACTGCTCGGTTTCAACAAACTCGACAGCGTCCCTGAAAGAATCTGTCAGCTCGGTAACTTGCGTTATTTATCGCTCGACAACAACAAACTCACGGAAATCCCGTTACTCATGGACCGGCTGGAACATTTACGAGAAACCGGTGGACTCTATCTGTACAACAACAGTCTGAAAAAACCACCACAAGCTATCTGTAATCAAGGAGTTATCCCCCTTTTCCTATTCTTAAAGGAGATGAGAATCAGTGCGGCGAAACATCGACGGAAGATGATTTTGATTGGTGCGGTAAGGGCGGGAAAGACGAGCTTGAGGAACGCCCTGCTACTTGGACATTCGCAGCTGACGGCGGAACACGAACGAACGTGGGTGCTAGAGCGCCATCTGTGGGAGCCGGAGTCCGATCTGAGGGTACAGATTCTCGATTTCGGCGGACATCATATTTACTCGGCTGCTCACCAGATGTTCCTGACGCCTGAGGCTCTGCACCTGCTGGTGTTCGACTACACGAAGTACAACATGGACAACTATGACCTACTCATTGGCGATTGGCTGGATGCCATTATTGACCGTGCTCCAGGGGCAACTATCATTGCCGTGGGCACGCACGCTGATCTCTGCAGCAACGAGGACATCAACGACAAAACGGACGACATAATCCGCAAGATGCACCGCGAGGAGAACACAAAGCTCACGAAGTTGAAACAGGAGATCGCGAAGATCCAGATGTTTTTCGACCAGCCTGAGGTGCGGGAGAGTCGCGGTAAGATCCGCGACACGAAGATCGAGAGGCTGCAGGAGAAGATGACTCACATGCAGAAGATGCTGAACACGCGTTCGCTGATGCCGGAGACCGTCTACGCCGTCAGCTGCGCAGACGATTTGACAGGAATTGAAGAGTTCCAAGAAGGTCTCATCCTAAGGCTGAAAGATAGTGAAGAGAAACCACTGCCCGATTCATGGCACAAATTCCTCTCCGAGATCCAAAACTATCCGGAGAAGATTCTTCCCTGGGACAAAGCCCTCAACATTTTCACCGACATCATGGCTGACATGAACCAGTCTATGATCAGTCTGGGTGGCTCACCGGAACTCAGCCTGGGAATGGTTCTCAAATACCTGCACTCAACGGGTGAGATCGTCTGGTTCCCCGACAACAACAAACTGAAGAACATCGTCTTTCACCGCCCAGAGACTCTGATAGAGATGCTGCGAGCTGTCTTCCGGCACGATTTCGAAGAGGTTGTCAACTTTGTCGAAGAGCACGGTTCCCAAGCGGATCTCTCTAGTGCACGATTCGATATCCTGAAGCAGGACTTCATTAAGAAAGGATTGATGGCGTACGAGCTGTTGAAATATACTTTGATTCATTTCGAGCTGTCGACCGACGCGCTTTCCACGTTCGTTTCCTTGATGCTGAAATTTGATCTGTGTTACGAAGTCCAAAAATCGTCTTCCAATCCATCGCTGGTCAGTTCGCCCTGCGTGCTGCTATTTCCTTGGTTTTTCCCTGAAGAGGTTCCCGAAAGCCTAAAAACAAAATGGCCGTCACAGACTCCACCCAACACCTTCGAACTAAGATACTGTTTAAAATTTCCCAACAAAGGTCCACCAAACTTTTTTGAAAAGTTTTCCGTCAAGCTGCAGAACCACGTTTCCGACAGGATTAACTGGAAGTCGGGCATCCTTGCTCGTAAAAACCTCTCCCAGATGTTGATTCAGAGGACGCAGGACGAAGATGGGGACTTGATAACAGTGTCAGTACGCGGTACGGACCTTCCCGAATTGTGGGGGTTGATCATGGCGACGCGGAATGATTTTATTTTGTTGTTGCAGGAGTGGCCATTTATTCGCTTCAAGCTGAACCTTGTTTGTACTCACTGCATCCTGCGGGGTTACGACAACCCGTACCAGTTTGACGGAGAAGTCCTGGAGATGACCGTACCCAGAGCCACCTACTGGGAAAACTGGTGCCGTAATTACGAAAACGATCTCATACCAGCCTGCTTCGTGTATCGCCTTGATCCAGATTACCAGGATGATATTTCCAAACATATGCAAGCAGCTACCGAGTTCCTGCAGAAATCCATGGATGCAGTTGATGGGGTACTAGGCCTCCTTTCTGACGCTGGGCTGATGTTCGTTGCGTCGCACATTGGTTTTGACTGGACACTGATCTCACTCAGTCTCGGACTCACTCAGGCCCAGATTGAGCAGATTCAGATAAGTCACCCCCATCAAGCCTTCCATCAGATCACGACGGCGCTAACCACGTGGCGAGATGCGCGGGATGTGTCTGATGACGAGAAGATATCACAGCTACTTACTGTGTTCGAGAGCGAAGAGATTGGCAAAATCGAACTGGCAGATTTACTGCGCGAACGCTACGGTTTGTGAATTTTTCAGCGGCAAAAACGAACTGGCAGATTTACTGTGTGAACACTACGATTTGTGAACTTTTCAGCTGCCTAATACAGTGAAAGCTGTTGTTTAAAATTGGACCCTGAACAAACCAGAATTGTGTCAAAACCGGCCAAGTGTTGTGGCCCCCAATTTTTCTCAGTTCTAAAATTCGACCCTTTAAACACAGGATTCTGTCTAAATCAGATGAATATTTTATGTCCCCTGTGTGATCCGGTTTAGACACCTTTCCTTGTCCATAAAATGTGAAATTTGGAACTGGCAGATTTACTGCGTGAACTTTTCAACTGCCTAGTATACACATACAATATAGCTCATTGAGTCTGTGAAGTTTTGAACTGGCAGATTTACGGTTTGAAAGCTATGATTGGTGAAGTTTTCAACTACCTAATACATACAATATGGCCAATTGATCCAGTGAAGTTTTGAGCTGGCACGTTTACTGTTTGAAAGCTTTGATATGCAAAGTTTTCAACTACCTAATATGTAAATGTAGCTCGTTGATGCTGTGAAGTTTTGAACCAGCAGATTTGAAAGCTATGATTTGCAAAGTTTTCAACTACCTAGTATATACATACATTGATGCTGTGAAGTTTTGAACCAGCAGATATGAAAGCTATGATTTGCAAAGTTTCAACTACCTAGTATATACATACATTGATGCTGTGAAGTTTTGAACTGGCCACTTTACTGTGAAGTTTTGAACTGGCAGATTTACGGTTTGAAAGCTATGATTTGCGAAATTTTCATATATGTAGTACATACATACTATGTAGGTCATTGATGCTGTGAAGTTTTGAACTGGCAGATTTAAGATTTAAAAGCTATGATTTGTGAAGTTTTCAACTACCTAGTGCATACAATATGGCAAATTGATGCAGTGAAGTTTTGAACTGGCACATTTACTGTTTGAAAGCAATGATTTGCAAAGTTTTCAACTACCTAATCTAACCGATTGATGCTGTGAAGTTTTGAACTGGCTGGTTTACTGTCCTGCACCTGTGAAGTACCAAACTGTCCTTTTTATTGTCACAGTAAAGTCTTGAACTGCTTGGTTTTCTGCATGCATGCTGTGATTAGTGAAGTTTTGAACTAGCCACTCACCATGTTTCAAAGTGATGAGATTGGCAAGAAAAATATCTAGATGATACAACATGAGTGCTATGATTTGTTCAGTTTTGAA

Transcript

ctg803-3.9-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00560	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF12799	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR025875	Repeat	Leucine rich repeat 4	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050216	Family	Leucine-rich repeat domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48051	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg803-3.9-1 global RNA-seq network