Gene detail

Detailed information of ctg8-18.22-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg8-18.22-1	PRO-INTERLEUKIN-16	chr2	5184453	5195647	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg8-18.22-1

ATGTCATATGTTGGCTTGTTCGGTACTGACATTTCATGTCTGTTGATCATAAGAGTGGGTGATATCATAGTTTCGATCAACAACACAGAGCTCACCGGTCAGTCCGATGGGAAAGTTCAGCAGGTCTTGAGATTATTACCGCGAGGGCTCGCCAAAATTGTTGTGTCTGCAGTGCCACCTAGTGGAGAAATTAAACAAGACAACAACTCCAATCAAAGTGAAGCTGACGACATGTCTTACTACCCAGGCAGAACATCTCCTTTCGGAGTTCGTCTCGGAGCAAAACCATTTAACGCTGCTGAGACCAAGTCAGTCACAGTTACCTCCCCTTTGTCAAGGGATAAACCATTCTTCAACTTAGGAAATAAGAAAGCATCTGCAAGTCCATCTCTAAAAGATGCAGCCAACAGTATAGAAGAGGAAAATGTTCAGTTGAAAAAGCAGGCTTTATTCCAAGAAACCAAACCCAATACTAATGAATCATTGGTCAATAATGAGCAGGTAAACAGAACAGCAATACAGTATGGTGAGGACACGAAAATAGAGGACAGTGTTTTTGTACCACAGGAAAGCAAGACATCTTTTGATACTTTGAATGGGTCGCCAGTGCCAAAAATATCTCCAGTGAGACCTCCGGTTCCAAAAGGAAGGAAAACATTACAAGAATCACACACTGAACCAGCTGCAAGTAGAGAACAGACAACTGATCAGGAAGTCATGAAAGATTCCAAGATGGAGGTAGAAAGAGAAGAAGTGATGTCCATGTCGACAGACATCAAAACAGAAAGTGAACCCACAACCAAATCCGAGCCAAATCTTGTAACACTGTCTGAACCAGACCATAATGTCCAGGGTAAAAATTCTCATCAGTCTGTGATCCCTGAACAGTTAACAGAATCAGCCGTCCATCCAGCAGTTTCTGAATTGGTGAAAGCTACAAGTGAACCTGAAGGTGTAGCAGAAACAGTTTCTGTGGAAGAGGAAATGAAAACAATTGACAAAGTAGATGGTACAGCTAAGGAAGTTTTTGTTGAGACACCAGTAGCTAAAACGTTTCCAGCAGTTCCACCTAAACCAAAAGGAAGAAAATCACTACAGGAGGCAAAAGTTGAGTCTCAAGACAAAGAAACACCCAAGGAAGAGATTTGTGGTGTTAAAAAGTCTCATATGTTTGGCCATCCAGCAGATATGGATCCAATTGTTGAAGTTTCCACCAATGGTAAGGTGTTCACTGAAGTTCATGTCCCTGCTGCCTTGAAGCCACGAGTCCATGCTGAGGCAGCCTTGGCCAGCAGTGCACATGCTGACTTTAAGATGGGAAAGCCAAAAATCCCTCCAGCAGTGCCACCAAAACCTCAACGAAAATCATCAGCAAGTTCAGACATCTCAACCTCATCTGTAAAATCTGAAGCCTCACATTCATCAGAGGAATGTAAACCTGAACCAAGAACAAGGACATTTTCAAACAGATCTGATGCTTCCTTCACTCTGGAGAACGTGAAAGCAGAGATGAAACCGAGACGGTATTCATCGAGTTCCAGCACCTCATCGCGCTTTGAAGATGCCACAAGTGATGATGAGACCAGCAGCAGCAGGATGCAGGAGAGGCTCGGCAAGTTTGAGGATCTTCAGAATTCTGAGAGTCATTCGTTGTTGAAGGGCAGGCCAGGAAAGAAACGAAGACACTCAGTTAAGGAGCACATGGCAATGTTTGAGTCAATGCAAAAACAGGACGAGATCCAGCATGGCCGGTCCGAATTAGCATCTCACAAGAGGTTAAGTGAACATGAGAAGAAGCAAGATGAATCTGCAGATGTCAAACTCAATGCAGCACTGTCTCCCAGATTCAGGGGTCTGCATAGTGGAAGCTACACAAAATCTGTTCCAGAGCGAACGCATGTGTCCTCTTCAGCTCCAGTTTCATTAACCAAGCCTACAACGTTGACGAAGCTGAAAGGTCTTGTGGTGCCCATGCACACCAAAAGACAAGACAGTGGCTCTGTAGCTCAATCTACCATTCCCCAGGGACTGTATACCAAAACTACCTCTGTAAACCTGAATTCTGCTCTAACAGCCAGAAAGATCTCAGAAGAGGAAACCATGCCAACAAAGATGCATTCTGCTCTGGCACCAAAACGGGCTTCCAGAGATGAGATTAAGATATTCACTGCAAAACCTTTCCAGGTTTATTCTAGTGGAGGTACTGGGAGTAGTTCATCCAGGTTGTCAGGTAAGGTTGATTTAGATGTTGTGGGCACAACTGCACCAAATGACCACTCTGAACAGTCACACATATCTAGATCTCACCCTGAAGCACTTTATTACAATTTGCCTGACCTTGCAGTAAAGACAAAACCTAATTCAGTTGAGGTTGATGAAGTGAAAGTTGAATCAAAACATATTACATCTGAACAGGCTGGAATTAAGTTGGATGATGCGACAATATCTTGTACTGATGACACTCTAGAAGCAGAAAAACCAGAGGTCATAGAGAAGGGTAGTGCTGGTAGTGATAAAACAGATTCAAAAGAACCAGGTGATATGCTGGAAGCACTCACAGAAAAATTGGCAAAGGATTTTGCAGTCTCTAATACCACATCAGGTAATACGCTTCGACAGCTCTCAGATGATGTTAATGCTGACAGTGTTCTAGTAGATGTCTTGTCACCCTTGATTAGTGAAAGGTCCAAAACCATTTCAGATAACACTCAGCTTAAAAGTAGTGTCTCAGGAAATGTGATGGCCGACAACCCTGAAGTACCATCTGCTGCAGATGATGTGTTGACTAAACTGTCAGCTGATATAGAAGATGATGAACAAAGCAAGACACAGCAAGACACATCAACAGACTTGCAGCAGCAGGTCTCAGATAATGTAATACCTGAAAAGTCTTCTGACAGATTGCTACCATTTGTTATAGATCACTTGTTAATGAAACTCTCAGCTGATGTTGAAGGAGATCAAGAAAGCAAGAGACACCAAGAGACATCAGACTTACTGCAACAAGTATCAGAGAAAGTCACAGCTGAACATTTCTCTGACAGCTCTGAAATGCCATCAGCTACAGATGATGTGTTGGGGAAACTGTCAGCAGATGTAGAAGGTGATGAACAAAGTAAGAGGCAGCAAGACACAAGTGACATGCTGCGACAGGTCTCAGAAAAAGTAATAGCTGAACAGTTTACTGACAGCTCTGAGGCACCACCATCTATTGCAGAACACTTGTTAGAGAAACTATCAGTAGATGTGGAAGGTGATGATGAAAACAAAAAGCACCAAGAGACAACCAGTTTGTTGCAACAAGTCTCAGAGAAAGTAATACCTGAACAGTCTTCTAACAGGTCAGTATCATCTGCTATAGATCACTTGTTACATAAACTATCAGCTGCTGAAATCCCATCAGCTACAGATGATGTGTTGGGGAAACTGTCAGCTGATGTAGAAGATGACGAAGAAAGCAAGAGAAAGCAAGATACAACTGACTTGCTGCAACAAGTCTCAGAGAAAATGATTGCTGAAGATTTCTCAGAAACCAACGAAATGCCAGCTGCTACAGATGATATCTTAGAGAAACTCTCGGCCGATGTAGAAGATGGTGAAGGAAGCAAAGGAGATAAAACAACTGACCTGCTGCAACAAGTGTCAGAAAAAATGCTATGTGAAACTTTTCCTGACAGCTCTGCTGAAGTGGACTTGTTGGGGAAACTCTCAGTTGATGTAGAAGACGACAGAGAAAACAAGAGACACCACATTCTTGAAACCATCACTGATGCCGAACCAGAAGCTGATAATGTGATTGATGAAGTTTTGATGCCTCAAGACACCTTGTGTCTAGATGATGTCATGCTAACAGAGTCCACCGATGATCAGATAAAAGTTGATACATCAGAGACCACTAATGCACTGTTGCTAGAACTAAGTGCCGAAGCTGAAGGGCCTACTGTGGATGCAGGCACAAAACCTTTTACCACCAAAAAAGCTGAATCTTCACCTCTTTTGATGTTTCTGTCAGAAATGCAGACAACTGCATCAGATGATAAACCTGTCTCTACCGAATCTCAAATTCTGTTAAGCAAGCCAATTTTTTTTCTGAATGATGATGAATATGATGAAGGAAAACAGTCTTCAGAGATGACAGCAACAGTTCTGGAATCTTTGAGTCATGAGGTAAGCAGAGATGAAGAGAAAATACCAACCCTAGACCCTGATGACCCTCAGCTAAACGCCAGGGTATCCAAGTTAGTTGAGGAGACCATTGAAGCAGCCATGGAAGAGATTGGTGGGATCCATCTTCAGACTGGAAACAGAAGTGACCATTCTGAAGACGAAGATCTGTCTCAGCAGGATGACACAGAAGATGAGGCCCCTCCACCCCCACTGCCAGGATCTGCCCCACCGCCCTTGCCAACCTCAAAACCACCAGAGTCATCAACACCAAAGGTAGACCAAAATAAAAGCTTTGTTGAGGATAGTACAAACAATATGGATGTCAAGATTCAAAATGGTGATCAAACTTTTAAGAATTTATCTACTGATGATGAACACAAAGATAAAGAATTGTGTAGTGTTGACGTTATTGGTGAGACTTTGGTGAAGGCAGAGAAGAGCAGTGTCACAAAATCTTCTATTCCAGCAAAACCTTCTAGGCTATTACCTTTGATTGACGGTTCACAGATCCCTTCAGAAACAAGTGTGTCATCATCAGAGATATCTTTACCGATGGATGTTCAGCATTCCACTAATCAGTTAGACATTGATACTTCATTTCCTTCACAGAAGGAAGCTTCTCAGGTATCCACTGAATATGGTTCCACCATTCCATCGCAGTTGTCTCCCATGAGTCAGAGTTCTGATTCAGGAGTTGTGGACATCAGAAATACTTCTGTTGACATTGATGCTGATGCAGATGCAAGTACTAGTGAGACTCTGATAGACGAGTTTGATGCTTTAAGTCCAACGAAAGATCAGAATAAGAAAGAATTATTCCAAATGGAAAGACAGCAAAGCAATGAGGAGTCCATTGCAGCCTTTGATTTGCTGATTGATTTTAATCAGACCCAGAAAAGTGATGTTGTAACACAGATGCAGGGCGATGTTGACCATCATACTGTGTCTTCAGATGACTGTGCATCATCGGCTTTTAAAGTAATGAGTGACAAAAAGACCAGTGAAAGTGCAATAATGAATTCAGATAATGGTGCTGTTGATACATGCAAGGATAGTTTAGTGAATCAACCAATGACTACCTCAGTCTTAGCTGACAGTGATCCCGAGTCACGGCCAACAGAAGAAAAGAAAGATCTTGGTACCACTGAGAATGAAGTTCCAGATATTCCTGCCAGGTTTGATAATAACCAACATGATGTTGATCAGTCAGTTGTTACTTCAGATGTGAGCTTGCATGCAGACTCAAGTCTGAGTTCTTTAGATACGATTGTACAGCCACACACAGCACTTCTTTCTCACTCAGATATTTCACCCTTATCACCACAAGAAACTGCACAAGAACCACCTGTACACACAGAACGGTCTCTGAATGTTGTTGTCTCTGAAAGTCGGGACTCTCTGAATGTGAACACTCGAGCACCATCACGGCCGGTACCCACACACATTATTGAGACCAGCATGCATGAGACTGTGTCAGAGAGCCACGACTCACATGCACAGATGATGTACACAGACTCACTTGGGCATGATGTCAGTGAAAGCAATGCTGCTGCTGCTGCTGCTGCACCAGGTCCTTCATCACATGATGATGGTGTTCTCAATTCTGAAACCCATGATGATCTTTCTAATATTCAGGTCTCAAGCGCCCAAGAATCGGTCGCAAAAGAGAACGGTGTACTCCCATCACAAACTGTTGATGGTGATGATGCTTCCAAAGAAATGGAGAGTCACACTCCCATTCCCATTAGTGAACCTTGTGATACTTCTTCAAGTGCTGATGATCTGAACACATCAAAAGATGTTAGCAGCTCAAAACATTCTAGTGAAAATATTGAAAAATCAAGTCTTTCAAATACAAAGTCGTCTGTTACAATTTCAAGCAGACGCAAGTGGAAAGTGCTATGGAAACCAAAAGACTCAGTTGTTCAGGTATATACTTCTGTGGCTGATGGTGCCAAGGAGTGGATGGTGTCTCCAGAAGAGATGAAGATGTCTGTTGACCTTGCTAACAGGATGATGGACAGAGCTGGCCAGGCTGAGGAAGATGAAATAAGGCTCGTGGTATTGAAGAAGGAGGTTGGAGTGAAAGCTGGGATTGAACTGAGAAATGGAGCCCATGGTACCAAAATGGTTTCCAAGGTTACCGAGAATGGACTTGCAGACAAGAGTGGATTGATACATGTGGGAGACTCTGTGTGGTCGGTCTGTGGCAAGTCGGTGAATGGTCTGTCCACCACAGACCTACACAACCTTCTTGATGCCCAGTCCTGTCTGCTGCTGGCACTGTCAAAGGGAAATAACTCTGTCACTTCTCCATCAAAAGAAAAATCATCAACAGAGTTACCAGCTTCACCAACTCCTTCAGCTCCAGTGTCTTTGCCAAATTCTCCAACCTCAAGTGAGTTGCCGCCCCCTGTTGTGTTGGAGCCAGGAGTGTTTGACATCACCATGCACAAGGGTGTCACCGGAGTGGGCTTCTGTCTGGAGGGAGGACTGGGCTCACCCCGGGGAAACCTCCCTATCACTATCAAGAGAATCTTTAAAGTAAACACTGTTCCACTTTTTTCTCTTTTCTTAATACCAGGAGGTCCTGCTGACAAGTGTGGTCATTTGAAGGTCAAGGATGAGATCCTGAAGGTGAATGACATAGATTTTACCGAAATGCGTCACTATGAAGCGTGGAATCACCTCAAGTTCCTGCCAGACGGGCCGGTGCATCTCATAATCAGACGTAAAACGTAG

Transcript

ctg8-18.22-1

Protein

ctg8-18.22-1

MSYVGLFGTDISCLLIIRVGDIIVSINNTELTGQSDGKVQQVLRLLPRGLAKIVVSAVPPSGEIKQDNNSNQSEADDMSYYPGRTSPFGVRLGAKPFNAAETKSVTVTSPLSRDKPFFNLGNKKASASPSLKDAANSIEEENVQLKKQALFQETKPNTNESLVNNEQVNRTAIQYGEDTKIEDSVFVPQESKTSFDTLNGSPVPKISPVRPPVPKGRKTLQESHTEPAASREQTTDQEVMKDSKMEVEREEVMSMSTDIKTESEPTTKSEPNLVTLSEPDHNVQGKNSHQSVIPEQLTESAVHPAVSELVKATSEPEGVAETVSVEEEMKTIDKVDGTAKEVFVETPVAKTFPAVPPKPKGRKSLQEAKVESQDKETPKEEICGVKKSHMFGHPADMDPIVEVSTNGKVFTEVHVPAALKPRVHAEAALASSAHADFKMGKPKIPPAVPPKPQRKSSASSDISTSSVKSEASHSSEECKPEPRTRTFSNRSDASFTLENVKAEMKPRRYSSSSSTSSRFEDATSDDETSSSRMQERLGKFEDLQNSESHSLLKGRPGKKRRHSVKEHMAMFESMQKQDEIQHGRSELASHKRLSEHEKKQDESADVKLNAALSPRFRGLHSGSYTKSVPERTHVSSSAPVSLTKPTTLTKLKGLVVPMHTKRQDSGSVAQSTIPQGLYTKTTSVNLNSALTARKISEEETMPTKMHSALAPKRASRDEIKIFTAKPFQVYSSGGTGSSSSRLSGKVDLDVVGTTAPNDHSEQSHISRSHPEALYYNLPDLAVKTKPNSVEVDEVKVESKHITSEQAGIKLDDATISCTDDTLEAEKPEVIEKGSAGSDKTDSKEPGDMLEALTEKLAKDFAVSNTTSGNTLRQLSDDVNADSVLVDVLSPLISERSKTISDNTQLKSSVSGNVMADNPEVPSAADDVLTKLSADIEDDEQSKTQQDTSTDLQQQVSDNVIPEKSSDRLLPFVIDHLLMKLSADVEGDQESKRHQETSDLLQQVSEKVTAEHFSDSSEMPSATDDVLGKLSADVEGDEQSKRQQDTSDMLRQVSEKVIAEQFTDSSEAPPSIAEHLLEKLSVDVEGDDENKKHQETTSLLQQVSEKVIPEQSSNRSVSSAIDHLLHKLSAAEIPSATDDVLGKLSADVEDDEESKRKQDTTDLLQQVSEKMIAEDFSETNEMPAATDDILEKLSADVEDGEGSKGDKTTDLLQQVSEKMLCETFPDSSAEVDLLGKLSVDVEDDRENKRHHILETITDAEPEADNVIDEVLMPQDTLCLDDVMLTESTDDQIKVDTSETTNALLLELSAEAEGPTVDAGTKPFTTKKAESSPLLMFLSEMQTTASDDKPVSTESQILLSKPIFFLNDDEYDEGKQSSEMTATVLESLSHEVSRDEEKIPTLDPDDPQLNARVSKLVEETIEAAMEEIGGIHLQTGNRSDHSEDEDLSQQDDTEDEAPPPPLPGSAPPPLPTSKPPESSTPKVDQNKSFVEDSTNNMDVKIQNGDQTFKNLSTDDEHKDKELCSVDVIGETLVKAEKSSVTKSSIPAKPSRLLPLIDGSQIPSETSVSSSEISLPMDVQHSTNQLDIDTSFPSQKEASQVSTEYGSTIPSQLSPMSQSSDSGVVDIRNTSVDIDADADASTSETLIDEFDALSPTKDQNKKELFQMERQQSNEESIAAFDLLIDFNQTQKSDVVTQMQGDVDHHTVSSDDCASSAFKVMSDKKTSESAIMNSDNGAVDTCKDSLVNQPMTTSVLADSDPESRPTEEKKDLGTTENEVPDIPARFDNNQHDVDQSVVTSDVSLHADSSLSSLDTIVQPHTALLSHSDISPLSPQETAQEPPVHTERSLNVVVSESRDSLNVNTRAPSRPVPTHIIETSMHETVSESHDSHAQMMYTDSLGHDVSESNAAAAAAAPGPSSHDDGVLNSETHDDLSNIQVSSAQESVAKENGVLPSQTVDGDDASKEMESHTPIPISEPCDTSSSADDLNTSKDVSSSKHSSENIEKSSLSNTKSSVTISSRRKWKVLWKPKDSVVQVYTSVADGAKEWMVSPEEMKMSVDLANRMMDRAGQAEEDEIRLVVLKKEVGVKAGIELRNGAHGTKMVSKVTENGLADKSGLIHVGDSVWSVCGKSVNGLSTTDLHNLLDAQSCLLLALSKGNNSVTSPSKEKSSTELPASPTPSAPVSLPNSPTSSELPPPVVLEPGVFDITMHKGVTGVGFCLEGGLGSPRGNLPITIKRIFKVNTVPLFSLFLIPGGPADKCGHLKVKDEILKVNDIDFTEMRHYEAWNHLKFLPDGPVHLIIRRKT

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR051890	Family	Pro-interleukin-16	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48396	PRO-INTERLEUKIN-16	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005125	Molecular Function	cytokine activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030595	Biological Process	leukocyte chemotaxis	Interproscan
GO:0042609	Molecular Function	CD4 receptor binding	Interproscan
GO:0050930	Biological Process	induction of positive chemotaxis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg8-18.22-1 global RNA-seq network