Gene detail

Detailed information of ctg709-3.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg709-3.5-1	TORSIN	chr6	22798079	22809328	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg709-3.5-1

GTTCAAGACAAAAAAGCATTTGCACAGATGGAGATTTATACAATATATTAATGACAATGTTATTCTTGAGTTTCTGTGTACAGTACAGCTGATTATCTAATTAAAGGGAGGCTTGTGTGTACTCCAGCATGCGATAGCTGCAAAATATAAAATTGCAAATGTACTTTCGATTTTGATTTACGGAAATATTTGATTACAATATGAATCTGTGGAAGACAATATTCATTTTATTTTATTTGTATATTTTAATACTTATTCCTGTTTGTGCAATTGAACCAATTTCTGGTATTTCTGCCGGTTTGGCAGTTGTAGTATCGGCGTTAGTTAGTAATTACCGTGGTATGAAAAGTTACTTCTCAGAATGCTGTGATGACAGATGGATTAAGAAAAATACGTCAGGTCTCATGCCTTCATTGGAGAAACATCTGTATGGCCAACACCTGGTCATGAAAGCTGTTATTAACCACATCAGAGGTCACATTAGATCGGAAAACCCTGCTAAGGCCCTCGTTCTGTCTTTCCATGGCGGGACAGGAACTGGGAAAAACCATGTGAGCAGACTCGTAGCACAACACCTGTATAACGAAGGGATTAAAAGCAAGTTTGTGCATCTTATATCCTCAACAAAGGAATTTCCTCATGAAGGAATGGTACCTTTTTATAAGGATCAACTTCGGAGTTGGATAGAAGGCAATGTTAGTTCATGTGCACACAGTTTGTTTATTTTTGACGAAATGGACAAGATGCCAACTGGGTTGATAGACACCATCAAGCCTTATTTAGATTACTATGATAACCTTGGTGGTGTAGACTACAAAAAGGCTATCTACCTGTTTTTAAGTAACACAGCAGGGCAGGAGATCACAGAGTTGGCACTGAAATACTGGGATGATGGGTCAACTCGGGAAGATATTACGCTGGTAGATACAGAAAGAATCATCATGACATCAGCGGTGAATACGAGAAGTGGCTTGTGGCACAGCGATTTAATCACGAAACATCTCGTAACAGCATTCATCCCTTTCCTGCCACTAACCAAGAACCATGTTATGGAGTGCATCAGAGATGAGCTTGTTCGCAAAAAATATTTCAGTAAAAAGGATTTCATTAAAGACGATTTAGTCAATAATATTTTGAAGGAAATGACGTTTTATCCTGAAGACAAACGTGCATTCTCTGTTACTGGCTGTAAGAGAGTATCTGAAAAAGTGGACTATATTATGTTGGAGTGATCTCTTCCATGTAAAGATCTTTGCAATATTTTTTGTAAGGTGTAGATGAAATGAAGCATGTTTTTTTCTAGCAGTTACTGTCACTGGTCTTGGAACCACAAATATACTTCAAAGACTGAGGTAATATTTGGTGGACCATTGTACAATTGTATGCAGACCTTAGTTTCAACATGTGAAAATACACACCAAGTTTGGTTAATCTACATACCTGTAACACATCTAAATAAAGTTACAAGAAAGTGAAGAAAGAGCCTGTGACGTTGAAATAGGGAAATATCCTTAGAAATAGACTCATGTTGGTCTTCATTTAACTGTAGAGATATGTATGTTTTTAAAATGTATGAAACATAATTCAGTATTTAGTGTTAGAAACATCAGGTTGACCAGAAACACTTCGATGTATGGAAAAGGATAATCTAAACTATAGAATTTAAGCAATGTCTGATTTCAATTCTCAAAAACAGTTCTACCAGGTAATAGTGAAAAATGTGCTGTAGTATATAAAAAATAGAGTCTGTCACTTTAAAAGTTGCTGATCTTACTTAAAGGGACTAACCTGAATTAGTAGCAATTTTAAAATGTTATCAGCAAAGAAAATACTTTTATATTATTAAAATTATAATTTACCTACAATTGTTTGATTAGAATATGAATCTCTCTATAACCAATGCATTTCTGGACATCGTAATTTTTTAATAGTATGATATTTTTATTTCTATAAATTTTTGTCTGAAATAAGTTCCTACTATAAATTTATAATTTGAAATAATTCACCCAAATGTCATTCCAAATGTATTTATTTGTGTAAGGCTTTACATTTCAAGATGGTGTTTTAAAAAAAAAAAAAGAAGAAAAAGCAGGATTTTTAAATTTTATTTTATGGCGAGAACAAACGGAAGTCTTGATAGAGCTGACAAGACAGGATGGTCTCTTTAAGGTTTTCCAGGTACATACCGTTTCTGTTTTGCATAAAATGCATTTCAAGCTACAATGGACACCTGGACAACAGGAAACATTTACCAAAACTGATAATTTAAGCAAAAAGTTGTAAGTAATATGTAATATTTAACACTTTCTAATACTATAACATACATGTATACTTCGGCTTTTCAAAATCAGAAAATCATCTCCCATTTTCAATCCGTTATTATGACATTGGACATTTTGTGACTTATTAGTGTCTGTCTGTGCACAACTGGGACCTCCTGTCAAAAATATTTATCAATGTTTTATATATCATTTTTAAAATCTCACTTCGACTACATGCTATCATTCAATAAAAATATTCTAATCAATTCTATTACCCGGTAGTTGAATATAAAAATAGACATGTTAAGTCTTCATTTATCTGTTATTTGTTAGAGGTATGTGTATTTGAGGTATATGAAACATACATTCAGTATTTAGTGTTAAAAACACCAGGTTGGCCAGAAACGCTTCCAATGTATGGAAACGGATAATCTATGCTATAAAATTTAAACAATGTCTGATTTCAATTCTCAGAAGTTTACCAGGTAATGGTGAAAAATGTGCTGTAGTGTATAAAAACTAGTCTGTCACTTTAAAAGTTGCTGATCTTACTTGAAGGGACTAACCTGGGTTTGTAGCAATTTTAAAAGGCTTTTGGCAAAGAAGATACTTTTAAATGATTAAAATTACAATTTACTTACATTTTTTTGTTTAGAATATGAATATGTCTATAACCAATGCATTTCTGGACATCATAATGTTTTGAAGTATCTCAATATCAATTTGTGTTGAAAATAATTTTTTATGTACAAATTTATTATTTCTTCCAATAGCCAAATGAAATTTGAAATAATTCAGCCAAATGTCAAATGTATTGATCCTTATAATGCTGTATATTAAAGCATTTTAAAGTAAGATAGTGTTTTTTGTTTAAAAAAAAACAGGAAAAAGTAGGATATGTTTTTTATTTTGTTGGGCGGAACAAATGGAAATCATGTTAGGGCTGACAACTCAGGATGGTCCTTTTAAGGTTTTCCAGGTACATATCCTTTCTGTTTTGCATAAAATGCATTTTGAGCTACAATGGACACCTGAACAACCAGAAACATTTACCAAAACTGATAATTTAAGCAAAACATTGTAAATAATATGTAATTTTTTAACTGGGATGATTT

Transcript

ctg709-3.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06309	Torsin	Torsin	Family	Interproscan
PF21376	TOR1A_C	Torsin-1A, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010448	Family	Torsin	Interproscan
IPR017378	Family	Torsin 1/2	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049337	Domain	Torsin-1A, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10760	TORSIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051085	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg709-3.5-1 global RNA-seq network