Gene detail

Detailed information of ctg658-4.19-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg658-4.19-1	SECY/SEC61-ALPHA FAMILY MEMBER	chr3	75209536	75225356	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg658-4.19-1

CGCAATCATTCTGACACGGTGTCAGTCTTGAAGTCTCTAATAATTTCACACATGCATGTCCAATAATCGAAATAAGATACCGTGTAGAAGAACTATAATCCATTTATAATGGGTATTAAGTTTTTAGAGTTTGTGAGACCGTTTTGTGCGGTTTTGCCAGAAATTGCAAAGCCAGATAGAAAGATTCAGTTTAGAGAAAAAGTGTTATGGACAGCCATCACCCTCTTCATCTTTTTAGTATGCTGTCAGATTCCATTGTTTGGAATAATGTCATCAGATTCAGCAGATCCCTTTTACTGGATCAGAGTCATCATGGCCTCCAACAGAGGTACATTGATGGAGTTGGGTATTACCCCAATTGTAACATCAGGTCTGATCATGCAGCTTCTGGCTGGAGCCAAGATCATTGAAGTGGGTGACACGCCCAAAGACAGAGCTTTATTTAATGGAGCAAATAAGCTGTTTGGCATGGTGATCACTATAGGTCAAGCTATAGTGTATGTGATGACAGGCATGTACGGAGACCCCGCCGAGATCGGTGCCGGTGTCTGTCTGCTCATCATCATTCAGCTTTTCGTAGCAGGTTTGATTGTCTTGCTTCTGGATGAGCTCCTCCAGAAAGGCTATGGTCTTGGATCGGGTATTTCCCTGTTTATCGCCACCAACATCTGCGAGACTATTGTCTGGAAAGCATTCAGTCCAGCAACTGTCAACACTGGAAGAGGTACTGAATTTGAGGGTGCAATTATTGCTTTGTTCCACTTGCTTGCCACACGAAATGACAAAGTTCGAGCCCTTCGGGAAGCTTTCTACAGACAGAATCTTCCTAATCTGATGAATCTCTTGGCAACAATTCTAGTGTTTGCTATAGTCATATACTTCCAGGGTTTCCGAGTGGATCTTCCGATCAAGTCTGCACGTTACCGTGGCCAGTATACGTCTTACCCCATCAAGCTTTTCTACACGTCCAACATTCCGATTATCCTTCAGAGTGCTCTGGTGTCCAATCTTTACGTTATATCACAGATGTTGGCAACTAAATTTGGTGGAAACTTCTTTGTCAACTTACTTGGAGTCTGGGCTGATGTTGGAGGTGGTGGGCCTGCCAGGTCATACCCTGTAGGAGGTTTATGCTACTATCTGTCGCCGCCGGAGACGTTAGGTCACGTCGCAGAGGATCCTGTGCATGCAGTTCTATACATAATATTTATGTTGGGCTCATGTGCTTTCTTCTCCAAAACATGGATTGATGTGTCCGGTTCAAGTGCAAAGGATGTAGCGAAACAGTTGAAGGAACAGCAGATGGTGATGAGAGGACACCGAGACAAGTCGATGATAAAGGAACTCAACAGATACATCCCAACTGCTGCTGCATTTGGAGGTCTTTGTATTGGAGCGCTGTCCGTCATGGCTGATTTTATGGGTGCAATTGGAAGTGGAACTGGAATATTATTGGCGGTCACAATTATTTATCAGTACTTTGAGATTTTTGTGAAAGAACAGAGCGAAATGGGAGGAATGAGCACTCTACTGTTTTAATTGACGAGACACGACTAACGAATTGTGCTGTTATATCAAATAAAACATTTATTAGTGATACTGGATTTATCTGGAATCTAAATTGTATAGTTTTTGTTTCTGTAGATTATTTATTTTCAAAAAGCCATTCTCAGACATGGTTACATTAAAAAAACAAAAACATTTTTCATTGTGACATAATACATTGTGTATGTATTTGTTAATTGATTTTCCCATATTTCAACAAATTATTGGTGAAAGAGCATTAAAATTATCCATCCTGAACATAGTGATACCATAAATCCATCAACCATTTTGTCAGTTTGGTTTTTATTTTCATAAAAGGAACTTTTAGTTTACCTCCTGGTATTTAAACTAGTCTTGTTTCAAACTTGGTTTTGTTTTAAATAAAGCAAAATTCAGTATTTTAAGTCTCAAAATTTTTGTTATACATGTATAACATTGTGTGTTTATATTGGGGAGGTATGAAAGCGAGTTTGTGAATACTCACAAATTGTCTTAATATATGTGTGTAAAACGAAGTAAAACATTTATTTAAATTTACAGAGTTGGATTTTTCTTTAATACAGATTATAGTACATTCTTTGATTGTATTATGCAGTACCTGCAGTTAAGAAATTTACAAATTGTCCCCATCACCGACATTTGGGAAATACAGGATTAAAAACGGGCATTTTTGTATATTATCAAAATCGTGGGTTATTCCTAAAAACTTATTTACACCTTGCAAATTTTATTAGGTGTTGGATGTAGCGCAATGGTAAATCGCCTATCTGATGTGCCGTTGGTCTGGGCTTGATCCCTGTCGGCCGACCCATTTCTCACTCCAGCCAGTGCACCACTACTGGTCTAGCAAAAGGCAGTGGTTTGTGCTATCCTGTCTGGGATGGTGCATATAAAAATCCTTTGCTACTAATGGAAAAATGTAGCAAGTTTCCTCTATAACAGTCAAAATTGCCAAATGTTTGACATTGAATAGCTGATGATTAATAAATCTGCTCTAGTGGTAGTGTTAAACTTTTTATCAAGTCAAAAAGTCGCTTAGCACATTGCAGAACACTATGTTATATGAACTGCCTGTTGCACAGTTAATTTCATGATCAACCATTTTATTGTAAAATTGCAAATGTTTGGGCTACCAGAACTTTATTGATGTCTATTAAATACATCCAACACCTATGGGACCAAGTAAAAGTGAAATTTTAATTTGTGTCCGTTTTTAAAGAGATTTTGTTCTGTACTGATATTTTAAAAAGGGACCATAGGTTTACATTGTGTGGGTGTTTTTTGGTATTAGAAAAGTAGTTCCCAGTCTCTACTTGGTAATCCAATAGTGTTCTAAACCTCGGTGGAAAGCACATTAGCAGAGCTAGCTCCCACTGTCGCCAAATTCACCAATTGCTAATTTTTACTTTGTATTAGAAAATAACTGGTTTTCTGCCATTTTTTAAAAGTTTAATAGATAATTTGGCGAAATTTTGTGTTCACCCAGAGCTAGCCCTGCACAGTAGTATAGTCATCATATTGTAACTTGTTCTATTTAAAATGAATTCAGAATGTAGTGTAGTGTGGTACAAGATCATGACTTTTAAGAATTTGAAATGTCTCCGGTCGAGGGACACAGGAATGCTAGACAAGAAACCTGCTGTGGCAACATGGATTACTCCTTGGTACCAGCATGGAATCTTTTTATATAGGTGAACACCTATCACAGCCTGTAAAAAGCAGGTTGAATGAAAATAACCCAGGGTCGATGATACAAACCATAGCACTGGTCACACAATTAATTACTCCATGCAGTTTAATACAGTTTCTATGTTAGAATATATTCTGTGACAAATAAAACACTATCGAGAGGGTCTGAGCGAGTGCTCCGCAAGGCTCAAATGGGTAGGTGTAAACCACTTGCACCGACCAGTGATCCATAATTGGTTCAACAAAGGCC

Transcript

ctg658-4.19-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00344	SecY	SecY	Family	Interproscan
PF10559	Plug_translocon	Plug domain of Sec61p	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002208	Family	SecY/SEC61-alpha family	Interproscan
IPR019561	Domain	Translocon Sec61/SecY, plug domain	Interproscan
IPR023201	Homologous_superfamily	SecY domain superfamily	Interproscan
IPR030659	Conserved_site	SecY conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10906	SECY/SEC61-ALPHA FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005048	Molecular Function	signal sequence binding	Interproscan
GO:0005784	Cellular Component	Sec61 translocon complex	Interproscan
GO:0006616	Biological Process	SRP-dependent cotranslational protein targeting to membrane, translocation	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0031204	Biological Process	post-translational protein targeting to membrane, translocation	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg658-4.19-1 global RNA-seq network