| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg627-3.1-1 | VACUOLAR PROTEIN SORTING 54 | chr4 | 62911281 | 62920903 | + |
| CDS | |||||
| ctg627-3.1-1 | |||||
| Transcript |
| ctg627-3.1-1 |
| Protein |
| ctg627-3.1-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10475 | Vps54_N | Vacuolar-sorting protein 54, of GARP complex | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019515 | Domain | Vacuolar protein sorting-associated protein 54, N-terminal | Interproscan |
| IPR039745 | Family | Vacuolar protein sorting-associated protein 54 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12965 | VACUOLAR PROTEIN SORTING 54 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000938 | Cellular Component | GARP complex | Interproscan |
| GO:0006896 | Biological Process | Golgi to vacuole transport | Interproscan |
| GO:0019905 | Molecular Function | syntaxin binding | Interproscan |
| GO:0042147 | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg627-3.1-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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