| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg56-5.19-1 | TRANSGELIN | chr4 | 44321473 | 44336056 | - |
| CDS | |||||
| ctg56-5.19-1 | |||||
| Transcript |
| ctg56-5.19-1 |
| Protein |
| ctg56-5.19-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF02187 | GAS2 | Growth-Arrest-Specific Protein 2 Domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR003108 | Domain | GAR domain | Interproscan |
| IPR036534 | Homologous_superfamily | GAR domain superfamily | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46756 | TRANSGELIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005884 | Cellular Component | actin filament | Interproscan |
| GO:0008017 | Molecular Function | microtubule binding | Interproscan |
| GO:0008093 | Molecular Function | cytoskeletal anchor activity | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| GO:0051764 | Biological Process | actin crosslink formation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg56-5.19-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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