Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg547-6.29-1 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN | chr9 | 18232447 | 18244389 | - |
CDS | |||||
ctg547-6.29-1 | |||||
Transcript |
ctg547-6.29-1 |
Protein |
ctg547-6.29-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
PF00385 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain | Domain | Interproscan |
PF08685 | GON | GON domain | Domain | Interproscan |
PF13518 | HTH_28 | Helix-turn-helix domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
IPR000953 | Domain | Chromo/chromo shadow domain | Interproscan |
IPR001584 | Domain | Integrase, catalytic core | Interproscan |
IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
IPR012314 | Domain | Peptidase M12B, GON-ADAMTSs | Interproscan |
IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
IPR016197 | Homologous_superfamily | Chromo-like domain superfamily | Interproscan |
IPR023780 | Domain | Chromo domain | Interproscan |
IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR46585 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
GO:0015074 | Biological Process | DNA integration | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg547-6.29-1 global RNA-seq network |