| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg506-5.20-1 | UBIQUITIN-CONJUGATING ENZYME E2 | chr6 | 9225643 | 9237142 | + |
| CDS | |||||
| ctg506-5.20-1 | |||||
| Transcript |
| ctg506-5.20-1 |
| Protein |
| ctg506-5.20-1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E2|UBC|UBC |
| Ubiquitin Family | UBD|Alpha-Helix|UBA |
| Ubiquitin Family | UBD|UBC-like|UBC |
| Ubiquitin Family | UBD|UBC-like|UEV |
| Ubiquitin Family | E2|UEV|UEV |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00179 | UQ_con | Ubiquitin-conjugating enzyme | Domain | Interproscan |
| PF00627 | UBA | UBA/TS-N domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000608 | Domain | Ubiquitin-conjugating enzyme E2 | Interproscan |
| IPR009060 | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR015940 | Domain | Ubiquitin-associated domain | Interproscan |
| IPR016135 | Homologous_superfamily | Ubiquitin-conjugating enzyme/RWD-like | Interproscan |
| IPR023313 | Active_site | Ubiquitin-conjugating enzyme, active site | Interproscan |
| IPR042614 | Domain | Ubiquitin-conjugating enzyme E2-22kDa (UbcD4) , UBA domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24068 | UBIQUITIN-CONJUGATING ENZYME E2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061631 | Molecular Function | ubiquitin conjugating enzyme activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg506-5.20-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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