Gene detail

Detailed information of ctg483-11.13-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg483-11.13-1	DOLICHYL GLYCOSYLTRANSFERASE	chr6	57985027	57995896	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg483-11.13-1

ATGCCACGACTTAACGCTGATTCCAGACATAGAGCTTTGGGGAATTTGGAGGCCGGAATGGATGCCAGGCAGGTTGCACGTGCTTTCGGTGTCCATGTCTCGACAATCTACCGTCTCATAGACCGATTTCTACAGAACAACAACGTCGTCGACCGTCCACGTAGCGGCCGTCCCAGAGTGACGTCACAGCGCCAGGACCGTTACATCGTCCGAACTCACATGCGTGATCGGTTCGTACCAGCCACCACAACAGCCCGGCAGACAGTGGGAACCCACAACCGCCCCGTTTCCTACACCACGGTACGACGTCGTCTGATCACCATCCATCTGAACTGTCGTCGACCGTACATTGGACAACGTCTCACACAGCGACACCGCCTTGCACGACACAACTGGACTGTTCTGCATCGACAGTGGCGGAACCGACAGTGGCAGAACATCGTCTTCTCCGACGAAAGCCGCTACTGCTTAGATAGGGCCGACGGTCGTATGAGGGTGTGGAGGCGTCGAGGTGAGCACTTCACAGATGCGTGTGTTATGGAGAGGGACCGTTGGGGAGGGCCTTCCGTCATGCTGTGGGGTGCCATATCCTGGGGACGTCGTGTACAACCTGTCATCTTCGACAACAACGGCCGAGGACGCGGCAGGGGCGTCACAGCACAGCGCTACATCGACGAAGTGCTCACGCCTGTGGTGGTGCCTTTTTTCGCGGGTCACCGTCAGATGGTTTACCAGCACGACAACGCCAGGCCACACACGGCACGGGCCACCCAGGTATTCCTGGCACAGCACAACATCATCACAATGGACTGGCCAGCTTTAAGCCCGGATCTGAACCCCATCGAGCACTTGTGGGACGAGGTTCAGCGCATGATGAACCAACGCCCTGCTCCCGTGGTGACACAGCAGCAGCTCCGCCAGGCCGTCGTGGACACCTACAACAACTTTATTTTTGTGGTTGCAGGTGCGGGTAAAGCTCCTATGTTTGGTGATTATGAAGCACAAAGACACTGGATGGAAATTACGATAAATCTGCCTTCATCTGAATGGTATAAAAACACTACAAACAATGATTTGCTCTATTGGGGCCTTGATTACCCCCCTTTGACTGCCTACCACAGTTACCTTTGTGGCTTATTGTCAAGGTATGTGAACCCTGACTGGGTGGCTTTAAACAAGTCTCGTGGATTTGAAAGCGAACAGCATAAACTATTCATGAGGTACTCAGTAATCATTGCAGATCTTGTGGTTTTTATCCCAGCTGTTTTATTCTACTGGATATCTCATTGGAGACTATTAAAATCAGAAAAGCTTGGTGGTGTACTGACCATGCTGCTGTATCCTGGATTAATCCTTATTGATCATGGACATTTCCAATACAACAGCGTCAGTCTTGGGGCTGCTCTACTTGGAATGGCCTGTATTGTGAGGAACCAGGATCTGTGGGCAGCCATCTTGTTCTGTCTGGCCCTCAACTACAAACAGATGGAGCTGTATCACGCTTTGCCTTTCTTCTCCTACTTGCTTGGCTCATGCTTTACCAGCAGTCCCACCAAAGGCTATCTCAAGTTTTCAATGCTGGTACTTGTAGTACTTATTACATTTGGTGTCTGCTGGCTTCCATTCTTACAAGATCTCAACACAGCTCAGGCTGTTGTCAAACGTCTTTTTCCATTCGGACGTGGATTATATGAGGACAAAGTGGCTAATGTCTGGTGCAGTTTATCGGTGATGATAAAGCTGAAAAAGCTTTTACCAGTGGATAAACTTGTATACTTGTGTTTGGGATCGACTGCTGTCTTACTGTTGCCTTCATCAATACACCTGCTGGTCAAGCCAACTGTTGAAAATTTCAAATTAGCTTTGGTGAGTTGGTTAAAGATTTTCTGGAAACAGTTTTGAAATGATTAATCACTGCAATATAGGATGTACAGGAAAGATAAAGCAAATTGTCATGTGTCTGACATAAACATAAGAATAGTTTTGATTTTGGTGTAATTTAATAGTGTAACACATTCTAAATTAAATAAAATCCCTCCAAACCAGATAAATGTTGAGGTCCCAAGGTGATCCACCTGCTTAAATATTTTTACTTTTGTCCTTATAGTGATCATTTCTATAGCCATTACCTGTCCTCAAACAAG

Transcript

ctg483-11.13-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03155	Alg6_Alg8	ALG6, ALG8 glycosyltransferase family	Family	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF13551	HTH_29	Winged helix-turn helix	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004856	Family	Glycosyl transferase, ALG6/ALG8	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12413	DOLICHYL GLYCOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006487	Biological Process	protein N-linked glycosylation	Interproscan
GO:0006490	Biological Process	obsolete oligosaccharide-lipid intermediate biosynthetic process	Interproscan
GO:0016758	Molecular Function	hexosyltransferase activity	Interproscan
GO:0042281	Molecular Function	dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg483-11.13-1 global RNA-seq network