Gene detail

Detailed information of ctg480-2.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg480-2.5-1	PROTEIN CBG16200	chr6	21333229	21354406	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg480-2.5-1

TTAATATGATAATTTTAAATTGTAAATAAATAGGTTTTAAAATATTCGGTGTGCATACATAGTTAAATGTACATGTGTATACAAAAAACAACTTACCTCCCAAAGTTCTGAATGATCGATAAACAAGAAGTTGCCCACAGTTATTACACGTGTCTTGGTAAAGAACACTTGTGGAGTATTTCAAAAACCCTCTCTTGTGTTTTGGAACACCACATGACTAAAAATATATTTATATATAATATGTAAAAATTCATTCTGAGTACAACAATATAAATTATATTAAATAAGTTTGATCAAGAATTGTCTTAATCATGTCCAAAAACAATTATTTTGTCTAATTAGTGTGCAGGTGGCAGGTACTGACGCTATGTCTGACCAGTACTGCATGAGGAACATAGACAATGTAACAAATGGTGGAACATAATTTGGATAGTTGATCCTGATGAACAAAGTGGAGGCCTTACTAGAGGTTTAGCCATAGGTCCATCTTTTATGAACTAAATAAAAACAACTTAATATAAACATATGCAACTGACACTGCTTTTTAAAACAATAAAAGTGTTCCAACAAAATTAACTAGCCAAAATAAAAATGCATTATTGGTATCCCAGTTGCATACTTACAGCAGATGTCAATTTTTTGCAAAAGGTCTGAAATGCCCTTCTATAAAAAGTTGCCATCTTAGACAGACTCGATTGTGATTTCTTTTTTACAGACGTGCTTTTTGATTCAGAACATCGAAAATTATCGAGACTGAAAGTGCAAGTTCTCCAAGAATTTCATAAATATTTTACGGCAATGATAACACTTTTAAGATTACCTCTATTTTTATTGTTATGGATGATCTATTAAAATGGAGAAGTACGAAAAAATAAGAGTTGTGGGGCGAGGAGCGTATGGTACAGTGCACCTTTGCCGTCGTCTGATCGACAAGAAGCTTGTTATCATCAAGCAGATCCCAGTAGAACAGATGACACGTGAAGAGAGGCAGGCGGCCATCAATGAGGTCAAGGTTTTGTCCATGCTCCATCACCCAAACATTATTGAGTACTATGAGAACTTCCTAGAAGACAAAGCTCTCATGATAGTTATGGAATATGCCCAAGGAGGAACATTCTTGGAATATTTGCAAAGCAGAAATAATAATTTACTTGAAGAGGAGGAAATACTGAAGTTTTTAGCCCAGATGTTACTGTCTCTTCAACATGTGCATTCAAAGCAAATCCTGCATCGAGATTTGAACTCACAAAATATTCTTCTTGACAAAAAGAAAGAGATTGTGAAGATAGGAGATTTTGGTATTTCTAAAGTTCTAAGCAGCAAGAGCAAAGCATACACAGTTGTTGGCACCCCTTGTTATATCTCTCCAGAACTTTGTGAAGGAAAACCTTACAATCAGAAAAGTGATATCTGGGCACTCGGCTGTGTGTTGTATGAACTGGCCAGTCTGAAAAGAGCATTTGAGGCAGCAAATCTTCCCGCACTGATCTTGAAGATTATGCGAGGAACGTTTGCCCCGATATCTGATCACTACAGTGAAGAGCTGCGGTCTCTCATTCTCAGCATGCTGCATCTGGACCCAAACAAAAGACCAGACATCAACCAGATCATGGCTCAACCGATCATCATCAACGCTTTGTTACATCTTCACACGGAAATGGGGAAAATTCCCTGTGTGAGAATTCACCGTCCATTGTCCAGTATGGCAGGTAATGCCAGAAGCAGAGTGTATGGTCGTGGAAACATGTCATCAAGAGATGGTATTCCTGTGAAGCCGGTGTCCCTGAGTTCAGTGTTTTGTTGGGGAGGTATTATAAATACACCAGTCAAACTTCCCCTACCCAGCAGTGAGACACAAGTCACGCAGGTTTCGGCAGGCCGTACCCAGAAAGCAGCGGTTACTAAAACAGGCAGACTGTTTGTGTGGGAGTCTCCAGGAGTAGGATCAGAGTCCGTGATTCCCGGTGCCGTGGAGAACTCTATGCCAGCGTTTATACCCCGGTATCTGGAGGGTCAGGCTGCGGTCACCATTCAACACGTCTCCTGTGGAGATCTTTTCACGGCTTGTCTCACCGATCGTGGTATTCTGATGACCTATGGCAGTGGAGCTAGTGGGTGTCTGGGTCATGGCAACTTTAATGATGTGGGACAGGCCAAGATTGTGGAAGCCTTGCTTGGTTATGAGGTGATTCTAGTATCATGTGGTACGTCACATGTCATGGCTGTAACCAATGAACATGAAGTATTTTCTTGGGGCAGAGGTGATAATGGGAGGCTTGGTCTTGGAAACCAAGAATCATTTTCGTCACCTCAGCCAGTGCCAATACCAAATAACCTGCGACCCAGCTCAGTGCACTGTGGTGTGGACTGCTCAATGATTCTAACACTGGACAACAAGCTGATGTGCTGTGGAAGTAATAGATATAACAAGCTTGTTCTGGATGAACTTGCACCAGACGGGTCTTGTACCAAATTGGTGGAGGAAGCTTGCATCCTCACTCTGATGTCCTCGGTACCCACCGGAGCTGCACTGGTTAAAGATGTTGCTATTGGAACATCACACTCGGCCATTGTTACAGTCGAGGGTCAGTGTTACACTTGTGGCTCGAACCAGTTTGGTCAGCTCGGTCATGACACGGAGAATCCCAGCAGACAGCCTCATCAGGTGAAAGCACTGCAGCCATACAAGATCACAAAGGTTGCCTGTGGCGACACCTACACAGTAGCAGCTTCAGAAGATGGAGAGATATTTTCTTGGGGCAAGAGTGCAAGGGGTCGGTTAGGCAGATCTGACGAGGACTCGGCAATCCCAAAACAAGTGCAGATCCCTGCCGATGACCAGTTTAGTATTGTGTCCATATCTTGCAGTCATGGAAACACTCTGATAGCAACAAAACCATTACATGGAACTGGAAATTCTTTGGATTGA

Transcript

ctg480-2.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000408	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR044120	Domain	Nek8, catalytic domain	Interproscan
IPR051997	Family	Serine/threonine-protein kinase NEK	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44535	PROTEIN CBG16200	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg480-2.5-1 global RNA-seq network