Gene detail

Detailed information of ctg383-4.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg383-4.5-1	DENN DOMAIN-CONTAINING PROTEIN 4	chr2	25149520	25171537	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg383-4.5-1

CTACCTTTCTGTCTATTTCAGATCGGGTGTAATAACTGATATCTTTGTGTGTGTTTCAAATCGGGTGTAATCACTGATATCTTTGTGTGTGTTTCAGATCGGGCATAATGGATGAGAAGCGGGTTGTGGACTACTTCGTGGTGGCTGGCCTGTCAGACAATCCGCTGCCACTGCAGGAATTCTTCAACGAAGCTGCCATCAAGCCGACGTTCAAGCAGGACCCCATCACTGACGTGACCATCATCAACAAGAACCTGGGCGAACGGACCCCCGTCGGCTACCAGTGTATTGATGTCACTCCAAACGGCTTCCCTGCTGACCTCAACCATGGCAGCATTCGCTGTCCAGAGATGTACATCTGTTTTAAACGAGGACGCCATAAACCACCACTCACAGATATTGGAGTCCTCTATGAAGGCCGAGAGAAGCTGATACCTGGATGTGAGGTTGTTCATACTACATCTACAGGCAATCCTGCCAATGTGAACAATGGAAGCAGTTTTCGAATATACATTACATATCGACGGGCACTGGAATCGGCAGCAAGTGATACTCTTGCAGTTACCGACATCTGTGTCATACTGTCTAACAAGAATGAAGAACCTCCATTAGCATACAACAAGATAAGCAAAAATCTGAACAAAGGAGTGGTTGGTTCTGACGTGTTCGTCTGCTACAAAAAGTCCATGAACAAGACCGATGTCATCTCATACAAACCAGAAATCCTAGACCGGTACCCGGAGGAGGACTATGAGAACTTTCCGATGCCCGACTCTGTGCCGATGTTCTGCTTACCGATGGGAGCCACGGTGGAGTCATGGCCAGCCAAAGCTCAACACCCACTTCCTATATTCTCCACATTCATCTTGACAGTACCCAACGCCAAGGTGTATGGAGCTGCGGTGACGTTCTATGAGGAATACGGAGATGGGGAAGTTGGTCTCTCGGATCTTCAGTTGCGATCTCTCGGATTGAAAAACAAACACATCCGAGAACAGTATCGGGTTTCAAAAACAATCCACACCAACAAGTCCATCTGTCTGCTCTCACACTGGCCATTTTTCGATGCGTTTAAGAAGTTCCTCTCCTACCTGTATAAAAACTCCATCACCGGTCCTCACACTGTGCCATTAGAGAGACAAATCTCTCACTTCATGTTCAATGTTCCCTATCCATCACCTGAAAGACCCAGGATTCTTATTCAGCTGAATAACGAGGCCCTGTCTCTCTGTATGCCAGAAGACTCCCCACTTCCACAAAACGGTTCGTCATTCATCACTTTGTTGAAGAACATGGGGCCAGATAACTGCTTGAGTATATTGTACTATGTTATGATAGAATGCAAGATTCTTATCCATTCTCTCCGACCGGCAGTCCTCACTGGAGTGGCTGAAGCTGTGACCTCGGTAATCATTGTCTTCTCATTAGTGTATCCTCAGATGATCTTCCCGTTCCACTGGCAGTGTCCGTACATTCCTCTGTGTCCTCTCACTCTCTCCGGAGTTCTCAGTGCTCCCTGCCCGTACATTGTTGGTATTGACTCCCGATACTTCGACTTGCATGACCCTCCGCCTGATGTGATATGTGTTGACCTGGACACCAACAGAATTTGCCTGCCAGAAGAAAAAAAAGGTCTTGGTCATAAGATGCTGCCAAAGAAACCTGCTCGCGTGCTGCTGGAGTCCCTTCATCGGTTGTTTGACATTCTCGTTCTCCAGCCCGATCAGCCCCACACTACAGACGAGGTCTCTCTCGAAATGGCACCCATTGACTACGACTTCAAGAGGAAAAACAAAGAGGTGTTGTGTGAGAAGAAAGAGACAGAGAGCCAGAAGATGAAATTGGAGCTACAGATACAGGAGGCATTTCTACGGTTTACGGCCAGTCTGTTAAAAGGCTATAAGAATTACCTGAATCCCATCCTCGAACGGCCCACACTGAGAGCCACTGACGCAGCTGTTCTGTTCGACATGCCCAGTAAGTGTTACACAAATCACAGCGTCATTAGTCTATAA

Transcript

ctg383-4.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02141	DENN	DENN (AEX-3) domain	Family	Interproscan
PF03456	uDENN	uDENN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001194	Domain	cDENN domain	Interproscan
IPR005113	Domain	uDENN domain	Interproscan
IPR023341	Domain	MABP domain	Interproscan
IPR037516	Domain	Tripartite DENN domain	Interproscan
IPR043153	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR051696	Family	DENN Domain-Containing GEFs	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12296	DENN DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032483	Biological Process	regulation of Rab protein signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg383-4.5-1 global RNA-seq network