| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg356-2.2-1 | SACCHAROPINE DEHYDROGENASE | chr3 | 43574324 | 43596948 | - |
| CDS | |||||
| ctg356-2.2-1 | |||||
| Transcript |
| ctg356-2.2-1 |
| Protein |
| ctg356-2.2-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF16653 | Sacchrp_dh_C | Saccharopine dehydrogenase C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR032095 | Domain | Saccharopine dehydrogenase-like, C-terminal | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR051168 | Family | Alpha-aminoadipic semialdehyde synthase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11133 | SACCHAROPINE DEHYDROGENASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004753 | Molecular Function | saccharopine dehydrogenase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0019878 | Biological Process | lysine biosynthetic process via aminoadipic acid | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg356-2.2-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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