Gene detail

Detailed information of ctg3155-0.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg3155-0.3-1	POLY [ADP-RIBOSE] POLYMERASE	chr9	37241577	37264103	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg3155-0.3-1

ATGGATCATGCAGATTCTCAGAGGCCTGAATGGGGCCACCCTGACAAGACAAGCGAGGGTGATGTGGCCCATGCGTTCAAGGCTGGGTCTGGTGGATCAGTAAATCTGAATGGAAACTTTCGTGATAGATTATTAGAATCAAGACTATCCACACTGACTGGAGCAACAGACTCCAAACCTGACCGAATTGATCTGAGGGCAGACAGCAACGTCTACACTGTGTTAGATTCCTTGAATTCAGACTTCGAAAATCTCAGCTTTCTTAATGATTCATCCGATGTGGTGTTGGGGGAGAATAAGAATGGCACAAAATCTTCAGCAGGTTATACAGTTGGTGGCGACACGCATTCAGAATCCTCAAATGTTTATTCATTTGGTAGTACTGGTAACATGCATTTGGACAGTTTAGGTAAAACCGGTCTAAACGGTACGGTACTAGCAAACAGTACTTTGTTACGTTTCAGTCCATTGACAGTGAAATATGACACAGATTCAGGTTTTGGGAAAGAAAAGGAGACCGATGTTTCAGAGCAGGTGACTCAAGAGACTGATATGGAAGTTGATTTGCCTTATACCCCAGAAAGACAGCCTCCAAATGAGATGACCATTGATGTGTCTACAACACCACGAGGCAAGCCTTATTGCATCGAAACATTTGATGAGGTTTCCAGTCAATTTCAGTGCAATTATTGTGGAGCTTACAAAGAGTGTGAGGAAGTAACCCAATGCTGTGATGGACATGCCGTATGTCAAAAATGTATTGAACCAGAGGTCAAGGCCATTTTTGCCAGTGACAGCCAGGTTCATATCAATTGTCCCATTAATCTGTGCGAGAGTGAGATTCCTATTGGTGAAGCAAAGAAGATTCTCCCGTCCATGGTGATAGACTTGGTCCAGGATAAAATGGATAAATATTGCCTAGAAAGTATCAACAACATGCCAAACATGTTCAAGTGTCCAGATTGTGGAGTGCCTGTTGAGATGGCTCCTGGGAATAAAGAATTCCAGTGTCAAAATGAAGATTGCATGATGACATGTTGCTGCTACTGCAAGAAGCCATGGAATGATAGAGACTACTCCAGCTGCAGCCCGGTGCTTTTGGCAGCAGACGACATTGCTGGTATGGAACAGTTGCCACAACACTGGGACCCAATGCCAGATAAGGACACGGATCCCCGTGACAAGGCGTTAAAATTTGCCGAAGATATGGGAATAGCGAGTTTCAAAGCGTCAAATGGATGGCTGGATTCATTCAGGCATAGGCACAACATCGTCGCAGGTACACTAAGTGGGGAGCGAGGTGACGTAAGTGATACTGCAGTTGAGGACTGGAAGTCAAAGTTGCCAGTGGTGTGTGACGGGTATGCTCCTAAGGACATTTTCAATATGGACGAGACCGGTCTGTTTTACAGGGATACAACAAAGGCAACCCTTAAAGTGAAAGGTGATGAATGTGCTGGCGCGAATACCACTTCCAAATTGCAACCGATGGACCAAGGCATCATACAAACAATGAAGCTCAAATACCGGAAAAGACAACTACAGCACGTGATCTCTGCCATGGAAAAGGATACAAGCAAGTGTGGTTCACAGCTTCTGAAAGAAATCAACATTCTGCAGACCATCTACTGGATCCACAATGCATGGAAACACGTGGAAGCATCCGCCATCCAGAAGTGCTTCGCAAAATGTGGGTTCAAAGATTCTGAAGTAGCTATTAGTGCAGCCAGTGATGTCGACACTGACGATGACGACGACTTGCCTCTAGTTATATTGGCCAAGTCAAAGCAGCTGTTCAACTGTACATTTCAAGAGTTGGCTGACTCAGATGCCGGCGTTCCAACCTGTGAGGAAGGATCTTTGAACTGGACCAGACCAACTTCGGAACTTCTGAAGAACTTCGGAGCCATCCCAGATTTCATCAGAGTAAAGTTACAGCCGGGATCGGAAGAATACAAAACCGTGATAGATAGCTTCCGTCACACGATGCGAGGCAGACTGGTGAAGTCGATCAGACGAATACAGAACCCACGACTGTGGCAAAAATATTTACTAACCCGGAAGCACATGTTGGATGATTTCGGAGCACAGAAACTCAACGAACAGCTCCTGTTCCATGGCTCAAACGCCGAGACTGTGAACGCTATCTGTAAGGAGGGATTTGATTGGAGGCTGTGTGGCCGGCATGGCACAATGTTTGGGAAAGGTACATATTTTGCTAAAGATGCCAGTTATTCTGATGGCTATTCTCACAGTGGTGATATGTCATTAAATTCCAAGGCCTTTCATCGAGGAGCAGCAATACTACAACATCCTACAACAACATTTTCACTTCCACCAACACCAGCACCACACCTGACAACAGTACAGCCATTTCCACGAACTGACAAGACGGGAAGGTCCAAGTTGATGCTGTGTGCCAAGGTTCTGTGTGGTCGTATGACGGCGGGAAACAAGCGTATGCTTCGGCCTCCACCGGATCCTGGTGACTTGAAGCAGAGACCGTTCAATTCTGCAGTCGATAACCCAATCAACCCATCCATGTTCGTAATATTTGAGAGTTCGCAGACTTATCCAGAATATGTTTTGGAATATTTATGATGAAGTGGTTCATGTCCTGTCTTTCTGTTCTAGCGCCATAATGGTAACTCAGTGGCACAGAAATAAATTGGGGCCATTGCATTGATCACCCTGACCCCCACCCCCCTCCTTCACCCAGCCCCACCTCCATCACTGGGCAGGCAGGATATAGCTTGGCAATAGAGCACATAACTCACCATTGTATTGGTCATCCTCACCCCCCTCCTTCACCCAGCCTCATCTCCTTCATCACTGGGTAGACTGGATATAGCTTGGCAATAGAGCACATAACTCACCATTGCATTGGTCACAGGCTGTGGTATGTGTTATCCTGTCTATGGGATGGTGCATATAAAAGACACCTTGCTACTAATAGATAAATCAATTTAAGAATTACAAATGATTAACATCCAATAGCCGATGATTAATAAATATCAATGTACTCTGGTGGTGGTGTTTAACAAAACAAACTTTTAACTTTTTTTTGTTTTTAGTCAAGTGTGCCTTGACACCACTAACAATCAACGTTTTATGATCTATGCCATTTTGTTTTAGTATTTA

Transcript

ctg3155-0.3-1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00644	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR012317	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR051712	Family	Mono-ADP-ribosyltransferase and antiviral protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45740	POLY [ADP-RIBOSE] POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg3155-0.3-1 global RNA-seq network