Gene detail

Detailed information of ctg261-8.15-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg261-8.15-1	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	chr11	19874752	19938913	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg261-8.15-1

ATGTTGGCCAAGATTGAAAACCAGACAGAGGAGGATTTCATCAGATCATTCATAAACATTAACCAAACATACTGGATCGGCGCCCGAAACGTTTCATCCGGGATGGTGTGGACGGACAATTCAAATGTGGTGTGGTCTAATTTGAACAGTTCCAGCCAGTCTGAAGATATGAACTGCGTTTCTCTGTCAGCCGGAACCTGGTTTGCTGAAAACTGCAACACCACCAACAGTTACCTTTGTCAGATAAATTTATTACCTAAGTGTCCAGCCTTGATTGCTGGGCCTTTCATGTCAGTGAGTAACACTACAGACCCAGTGTATGTAAACGAGACTCGAGTTATGACCTGTGATATTGGTTACCGGTTTCAAGGGACGGGGTCAAGGTTACAGGAAGTTGCGTGTCAGATGAACGTGAATACAGGGGACGCGGAATACAACAGCACTCTCGGTGTCTGTGAAGAGCTCTGTCTGCTTTTATTCCGTAAATGTTTGAACTTTGACACGGACGACTTTGATCTGGTGCAACGGAACCCGAAAGGATCTCATAGACTCTTGTTTCACTCTCTTGTAACGTTATCCAAATGTGTTACAGAAGTCACGTGTTCTACATTGCCGACATTTTCCGAAATGATATCGTCCTATAACACAACAAACTACAACAGCAGCCTCGTTTTGAAGTGCACTTCCGGACATTCCAGATTGCCATCCAGAATAGTAAAGTTTACTTGCAATGCGACCGGAAGCTGGGAACCGGATACAGAAAATGACGCAATATTCTGGAAATGTACAGCATCGCTAAGGTATGAAGGATGTTTCAACAATGGCTCCTTGTCTGAGAACGTCACCACGGTAACCAGTGTATCTTCCTGCCACGTCTTCTGTCGAGAACAGCAAGCAGCGTATTATGGCTTAAACGGCGACCGGTGTTATTGTGGAAACATGCGAAACACTTCGGGAAAAATTCCAGACAATACCGAGTGCTCGCTTTCATGCTTCTACAACCCAGAGGCCATGTGCGGCGGGAAAGAAGATCAACTGACAGTCTACAAAGTTATAGAGGGTTGTTACAAGTTCACTGAGAGCGAATTACTGGTGGAAACATGGCGCTTCAAAGCCAATGGAAACATAATCTTTACTTGTCGTGAAATCTGCAGAGGGAAGGATGATTTCAAACTGGCCATACTGCTCATCAGCGGTTACTGCGTCTGCGCAAACCGCACCAACTTGACAACGTCTTCTCCCAGCATTCCCTGCACTACGTTTGAAGGAAGCGAGACGTTTCCCGAGCAGGTTAATATAACTGGGAATGTCTATACTTTAGGGTCCTATTCACTAATCGGAAAGGGGACCTGCAACAGTCTGTACGAAAAGGGGATTCGATATCACGGGACCTACTACGTATCCGATGAGGTTAAAGAACAGTGCAATTTTTATGATGGTACAATGTGTGCCCAGGGATGGATCGGAAACGAAGGCAACTGCTACGCGTTCGGCCCTAACAACAATTTTAAGGTGGCGTTCAACTACTGCCGCGGCCTGGACTCCCACATGGTGACCATCCTCACAGAAAGCGAACACGAGTTTCTAAGGGACACTATCCGAAGTACAGAAGAAGAGTATGTTGAAGTATTACTTAAGAGTGATTGTGAGAAGCAATACGTGTCAGTAGCCTACAGTGCGTCAAGCTACAATTCGTTCCACATTGGTCTGTACGACTCGTCCCAGTCCGGGAACTACGAATGGCACGACGGCGCCGTCTTCGCCTTCAGTCGGTTTGCGAGTCACGAGCCCGACTACAGCGGCCACTGCGGGAAGATGTACGTCGGCGGCAACGGCATCCTCAGCTGGGGCGACTCTGACTGGTACAAGAAGAGAAACGCAGTCTGCAAGCGAAATCCAGGCGTGTACTACGGATGTATCGAAGTGCTAGCGTCTGACCTTGACCCTCTTCTCACAATCAGTAGCGAGGCGATGACGTTTGCTGTCTGCTTCCAGAAGTGTCACGCTAGTTCGAAATCGTATTCCGCCGTGGTGAACACAGACTGTTTCTGTTTCGACGAGCCCCCCTCTCACACTAACCTGTCCTGGACAGAGTGTTACCGCCCCTGTCCTGGCCATCAGTACCAACCCTGTGGAGGATCATCCAGTGACGTCACCAAGAAAATTGTCTTCGTCACTGGAGGAGGAGGTGTCACCTGTCCACTCACTTGGATCAGCGTCAACGGCAAATGTTACAAGTTCAGCGTTGCCACCAGAGACGTCCCTTCAACCATGTGTACCCAACATGGCGGCTACCTGACCCCGCTCGACCAACCAGAAGACATCGAATTGTTACGCCGCGTGATCAACAACGCCACCTACCTGCGCGGGCCGCAAGCGTGGCTGGTAGGACTGTTCGATATGAACATGCAGGGGCGGTACAGGTGGGCGAACGGGCGTCACTTTGATGCGTCATCACTGACGTTGAATAGAGAAAAGTGGAATCATCGGTGTTTCGGCTTCTATGAGAACTCGTCGAGCACGGATTTGCAGGAATTAGACTGCTCAACCACGAGTTTTATATGCACCAAAGATCAAGACTACCTCGGCTGTTACAAAGCACCGACATCAGCTGCCGTGCTTAGTGGTTACCACGACAACAGCATACAGCAGTGTGTGGAGACGTGTCGCAGCGTGGGCACGGCGTATGCCATGGTGCAGCAGAGCACATGCTGGTGTGAAGACGTCCTCACCAATGTCACCAGCGGCGACGACTGCTTGGAATTCTGCATCTCCAACTTCAGCCAGGCGTGTCCCGGGACGACCACCGGCAACGTGGCCGTCTATTCAGTTGGGGCCTACACGCCGTACGCCACTTCATGTGAGGATCTCTTTAAACAGGGCATCATGGTTCCTGGCAGTTACGTCATCAACTCAACGACAATGTGGTGTTCATTTGCAGATAACAGTTCGGCGTGCACCAGTCCCACAGACGGATCCTGGGTTGGTGTTGGTAAAGATGGAGTCTGCTTCGTACTGGACTTCGCGAAACGTAACCATTCACAGGCGGTGGAGGCTTGTCACGAGAAAGGAGCTCTGGCGTCCATACACACACAAGAGGAACTGAACATGCTCATGGAAATACTGTCAAATTCCAAGACCTACCAAAAGTCGATTTTCATCGGCGGATTTGACGAGTTCAACCAAGGACTATTCGCCTGGTCTGATGGGACTCTGATGAAGTTTGCACCCTGGGACAGCGACTATTTACATGTGGGGGAGGGACGAACCATGGCTATGGACGTTGACAACATTGTCTCATGGGGGAATGATGTTTCTGAAGAATTAGAAATGCTCTATATTTGTCGAGAGGTCACAGATTACCGTGGTTGTTATGTGAAGGACGCCAACATGGTTCCAGTCGAGTCCCACTATCTGACGATGTCTCTGACTCTCTGTAAACAACTCTGTATGGGTCAAGAGAAGAAGCTCGCTCTGGTACACCCATCCAGCTGCTTCTGCGCAGACGAGGCGGAAGTCGCCGCCATGACGTCGGTCAGTGACGTCACCTCGTGTGACACGTGGTGTCCCGGAAACAAGCTACAGTTATGTGGAGGGGAGAGTGCATTACGAGTCTACACGTTAGACTACGACGATGTTGCTGAAAACTGCAGCGTTCTGTATGGAAACGGAATTTTGTATGAGGCGACCTACCTGTTGAGGAATTCCTCAAACGGGCAGAATTACACTGCGACGTGTGGCTTTAACAAGAATTCTACATGCCAGCCAGGCTGGATTGAACACAATGGAGACTGTCTGTTCGTTGTGCCCAGAAAATCGTCGCTGACAGACGCCGTGGACGGATGTACGGCGCACGGAGCTCACCTCTTCACTCCAGACGATAACGAGACGCTGGTCTTTATGACGAACCTTCTGAAGCAGGTGGCTCCTTGGTCCCGCTTCCAGTACTGGCATGTGGGCGCCACGTCCTTAATGAGGAACGCCTTGTACCAGGCGGCGGACGGGAAACTACTGAACATGACGTCGATGATGGAGGACCACCTGGGCTGGTCGTGTCTGGTCATCGACATCTATAAAGGAAGCTTGATCAGACAGAAGTGTCAGCCCACTGAGAAGATTCCGTATGTCTGCGTCAAATCAAAAGCCATACCTACCCTACCTACCTGTAAAGACCTGTTTCAGTATGGCGTCACTATGCAGGGCACGTACATCATATATCCGACTGGAGAACCTTTCTACACAGAATGCTTTGCAACAGGTATACAATATGATCCTATTTTGGGCAGTACCACTGGACTTCTAACTGCGTCATCTGAAAATGATACGAATATTGCCGAGAACGCAAGAATTGCTTCAGAATTGATCTCTGCCAAAGTGTGGAAGCCAACATCATCAGATAATGATCCGTGGTTACAGATAGAATTACTATCAGACTATCTTATAACTGGCGTAACAGTTCAAGGTGGTAGGAATGACTTTTCCCAGTGGACAACATCATTCGGTCTCCAGTTCAGTTTTGATGGCGACAGATGGGATTCGTATGCAAATGAGCTACCAGGCAACTCGGATCCAACGACCCCAGTGACGAACTTCCTATTACAGCCCTTTATATCGAAGTTCGTGAAACTGATGCCGAACAAAGACGAGACTGTAGTCGGTATCGCCTTACGGCTTGAACTATACGGACAAAGATATGAAGTCTTTAATCATGCTGATCGCTATGTTGGATGTTTTGCGTATTTCAATATTTCTGATTTTGGCCTTGTGAGTGATCTGATTTCTGTCGACCAGTGCAGACAGCAATGTCGGTCATCCCATCCGTTCTTTACCATTGTGAGAGAAAACACAACGTCTAAATGTGGTTGCGCACATGTTTTTGATACGTACGGACGCTTGGATGACTCCGCTTGTAATGGCGCATCTCACACCGGAAGTACCCCGGCTGGAAGCGAGGCTCGTCATTCTGCGGCTGCATTCAGAACGTATGACACACACTGCCCCGATGTCGACACCATCGCCAACGTGACCGTGACCGTCACGCCTCGCTACACCACGAACAGCACGGTGATGACGTATGGCACAACGATACGGTACACGTGTGTACTTGGGCACGAGTGGACGGACACGGAAGATACGAAACAATCCATCACCTGTCGACAGAACAACACCTGGTCAGATACCGTCCGACCGTGTCAAATAAAATACTGCCCTGAACCACTCTCGATCCCTAACGCAACGACGACGTACACATCAACGCACTACGGCTCGACGGTGAACTACGAGTGTGACCCCGGGTTCGAGTTTTCTCCTGGAGTAGCCACGCTCGTCAGCGAATGTCTGGATACAAAAGAGTGGAATGAGACCACGCCAACATGTCAACGCAGGCCGTGTCCGAGTCCACCGGATGTTGCGAATGCGGTGAGAGACGGCGAGTTGGAGACGTACAGGTACGGGGACAGCGAGGTGTACACTTGTGTACCGAGTTCCGCCTTCAGCGACAACAGCACCCGCCAAAATATCACGTGCACGGTGTATGGGAACTGGACAGAGATTGACAACAGCTGCATCTATTTTGAATGCCCCGAACCTCCTCTGGTACCCAAAACTGCGATTAACCGAATTTCTGAAGATGTTGCGCTTTACAGGTGCATAACAGGCTACGAGTTTTCAGATATGTCGCCATTCGTGACGTCAACGTGCGGGGGCGGATACGGCTGGAGTGAACTGCCCGTCAAGTGTGTCCTACAAGGGGAGGCGAAACACAGAGAGACACCAGTGTGTGTCGCTGGAATTGGTAAGAGGTCATTGGGTGACTTTGAACTCGTCATCGCTAGAAGTAAGTTTGACTGTGCCAGCGCCTGCCTCAACCATGACAGCTGCCACTCCTACAACCACAGACCCGATTTCCAGGGCGAAAACTGCGAGCTTTTAGTGGGCACCTCCACCACCTATGAAGACAGCTCCGACCCTGAATGGAATACGTACCGGCTGAGAAAGACGTGTGGATAA

Transcript

ctg261-8.15-1

Protein

ctg261-8.15-1

MLAKIENQTEEDFIRSFININQTYWIGARNVSSGMVWTDNSNVVWSNLNSSSQSEDMNCVSLSAGTWFAENCNTTNSYLCQINLLPKCPALIAGPFMSVSNTTDPVYVNETRVMTCDIGYRFQGTGSRLQEVACQMNVNTGDAEYNSTLGVCEELCLLLFRKCLNFDTDDFDLVQRNPKGSHRLLFHSLVTLSKCVTEVTCSTLPTFSEMISSYNTTNYNSSLVLKCTSGHSRLPSRIVKFTCNATGSWEPDTENDAIFWKCTASLRYEGCFNNGSLSENVTTVTSVSSCHVFCREQQAAYYGLNGDRCYCGNMRNTSGKIPDNTECSLSCFYNPEAMCGGKEDQLTVYKVIEGCYKFTESELLVETWRFKANGNIIFTCREICRGKDDFKLAILLISGYCVCANRTNLTTSSPSIPCTTFEGSETFPEQVNITGNVYTLGSYSLIGKGTCNSLYEKGIRYHGTYYVSDEVKEQCNFYDGTMCAQGWIGNEGNCYAFGPNNNFKVAFNYCRGLDSHMVTILTESEHEFLRDTIRSTEEEYVEVLLKSDCEKQYVSVAYSASSYNSFHIGLYDSSQSGNYEWHDGAVFAFSRFASHEPDYSGHCGKMYVGGNGILSWGDSDWYKKRNAVCKRNPGVYYGCIEVLASDLDPLLTISSEAMTFAVCFQKCHASSKSYSAVVNTDCFCFDEPPSHTNLSWTECYRPCPGHQYQPCGGSSSDVTKKIVFVTGGGGVTCPLTWISVNGKCYKFSVATRDVPSTMCTQHGGYLTPLDQPEDIELLRRVINNATYLRGPQAWLVGLFDMNMQGRYRWANGRHFDASSLTLNREKWNHRCFGFYENSSSTDLQELDCSTTSFICTKDQDYLGCYKAPTSAAVLSGYHDNSIQQCVETCRSVGTAYAMVQQSTCWCEDVLTNVTSGDDCLEFCISNFSQACPGTTTGNVAVYSVGAYTPYATSCEDLFKQGIMVPGSYVINSTTMWCSFADNSSACTSPTDGSWVGVGKDGVCFVLDFAKRNHSQAVEACHEKGALASIHTQEELNMLMEILSNSKTYQKSIFIGGFDEFNQGLFAWSDGTLMKFAPWDSDYLHVGEGRTMAMDVDNIVSWGNDVSEELEMLYICREVTDYRGCYVKDANMVPVESHYLTMSLTLCKQLCMGQEKKLALVHPSSCFCADEAEVAAMTSVSDVTSCDTWCPGNKLQLCGGESALRVYTLDYDDVAENCSVLYGNGILYEATYLLRNSSNGQNYTATCGFNKNSTCQPGWIEHNGDCLFVVPRKSSLTDAVDGCTAHGAHLFTPDDNETLVFMTNLLKQVAPWSRFQYWHVGATSLMRNALYQAADGKLLNMTSMMEDHLGWSCLVIDIYKGSLIRQKCQPTEKIPYVCVKSKAIPTLPTCKDLFQYGVTMQGTYIIYPTGEPFYTECFATGIQYDPILGSTTGLLTASSENDTNIAENARIASELISAKVWKPTSSDNDPWLQIELLSDYLITGVTVQGGRNDFSQWTTSFGLQFSFDGDRWDSYANELPGNSDPTTPVTNFLLQPFISKFVKLMPNKDETVVGIALRLELYGQRYEVFNHADRYVGCFAYFNISDFGLVSDLISVDQCRQQCRSSHPFFTIVRENTTSKCGCAHVFDTYGRLDDSACNGASHTGSTPAGSEARHSAAAFRTYDTHCPDVDTIANVTVTVTPRYTTNSTVMTYGTTIRYTCVLGHEWTDTEDTKQSITCRQNNTWSDTVRPCQIKYCPEPLSIPNATTTYTSTHYGSTVNYECDPGFEFSPGVATLVSECLDTKEWNETTPTCQRRPCPSPPDVANAVRDGELETYRYGDSEVYTCVPSSAFSDNSTRQNITCTVYGNWTEIDNSCIYFECPEPPLVPKTAINRISEDVALYRCITGYEFSDMSPFVTSTCGGGYGWSELPVKCVLQGEAKHRETPVCVAGIGKRSLGDFELVIARSKFDCASACLNHDSCHSYNHRPDFQGENCELLVGTSTTYEDSSDPEWNTYRLRKTCG

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00024	PAN_1	PAN domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF01822	WSC	WSC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR002889	Domain	Carbohydrate-binding WSC	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR050350	Family	Complement & Cell Adhesion Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19325	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg261-8.15-1 global RNA-seq network