Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg2608-0.1-1 | RAN BINDING PROTEIN | chr1 | 10350587 | 10362280 | + |
CDS | |||||
ctg2608-0.1-1 | |||||
Transcript |
ctg2608-0.1-1 |
Protein |
ctg2608-0.1-1 |
Gene family | Subfamily |
---|---|
Ubiquitin Family | E3|E3 activity RING|RING |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00638 | Ran_BP1 | RanBP1 domain | Domain | Interproscan |
PF13445 | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000156 | Domain | Ran binding domain | Interproscan |
IPR000315 | Domain | B-box-type zinc finger | Interproscan |
IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
IPR001876 | Domain | Zinc finger, RanBP2-type | Interproscan |
IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
IPR027370 | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
IPR045255 | Family | Ran binding protein RanBP1-like | Interproscan |
IPR045256 | Domain | Ran-specific GTPase-activating protein 1, Ran-binding domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23138 | RAN BINDING PROTEIN | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005096 | Molecular Function | GTPase activator activity | Interproscan |
GO:0005643 | Cellular Component | nuclear pore | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0006913 | Biological Process | nucleocytoplasmic transport | Interproscan |
GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
GO:0046907 | Biological Process | intracellular transport | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg2608-0.1-1 global RNA-seq network |