| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg23-0.1-1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED | chr9 | 27187581 | 27222559 | + |
| CDS | |||||
| ctg23-0.1-1 | |||||
| Transcript |
| ctg23-0.1-1 |
| Protein |
| ctg23-0.1-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00595 | PDZ | PDZ domain | Domain | Interproscan |
| PF21219 | USH1C_N | Harmonin, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 | Domain | PDZ domain | Interproscan |
| IPR030237 | Domain | Harmonin, N-terminal | Interproscan |
| IPR036034 | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR051844 | Family | Sensory Perception USH2 Complex Protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23116 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002142 | Cellular Component | stereocilia ankle link complex | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0005929 | Cellular Component | cilium | Interproscan |
| GO:0032426 | Cellular Component | stereocilium tip | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg23-0.1-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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