Gene detail

Detailed information of ctg227-3.14-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg227-3.14-1	SEQUESTOSOME 1-RELATED	chr6	41656424	41662741	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg227-3.14-1

TGTCACAGTTACTCAGCAAAGTTGATTCTGTTGTTGAATGTCTGCGTAATAGAGAACAAACCTGTGTGGTATATAAAGAATACAACAGCATTTCCATCCAGCATACACACCAAGTTACTACCGAGAGTCATACCGTATAATACGAAAGCGTGACACTGAATAAATAGCATTTCAAACAGTTTTCAGCTTGTGAGTCGATCTGTGGTTCCTGTCATTTTCAAGGACACTTCTAATCTATTGACAATTGGCTAGCATCAACTATCATCAAGAAAACTCGAAAATGTCTATGGTGGTGAAAGCTTTCCTGGAAAAGGCTGGAAATCCCAAGGCCGAGATCCGTCGGTTTACTATCCCCAGCGATGTCACTTCCAGTTACATCTACATACACAAGAAAATATCCGAAGTGTTTCCTGGTCTTCTGAGACAAAACTTCGGTCTCTATTGGAAAGACCAAGAAGGAGATCTGGTTGCGTTTTCCTCCGATGAAGAACTGTTGGATGCATTAGGCTTTGTTAATGACTCAGTCTTGAGGATATATATCAAGGGGCTTCACCCAGAGCATGAAATGTGTAAGATTCCCACTCCAAGACCTAGTGGCAATGGGAAAATGCCGTTTGTCCCACCACCTCACCTGCGTCGATGGATGAAGCGATTTATGAACCGTTGGCACAACAATAATGGCTGCCCTTGGACTGAGGGTGCTGCCCCACCAAGTGATCAGAGCAACAAGACCGAGGCAGGTGAAGGGTCTAAAGAGGGAGCCCCAGACAACAAGGAGCAGGAGGAGCAGGAGAACTCCACCCCAGAGGAAGATTTCCTCTTCAATATTGGTGCCGATGTCAAGGAAATGCTTGATCCTTTCGGAATTGATGTTGACATTGACATCGAGCACAATGGACGTCGCCATGGTTGCCATAAACAATTTGGAAAGGGTTTCAGGGGTCATGGATGTTTCAGAGGATTTCCACCACATGGTCCTGGGCATCATGGACCTGGACATCATGGACCTGGGCATCATGGACCCTGGCATCATGGATGGGGGCAAGGAGGAGGATGTCCTATGAATTTTGAGCAAGCGACTGCTCCGGCTGATAAGGAACAAACCACCACACAGTCTGACCAGACACAAGAACCAACCAAGGATGCCAACACTCCAAAGGAATCCAGCTCAGCTGCATCGGAGCCAATGAATGTTGGTGTGGATGGCAATCTTGAGACTGATGGAGGACCCAAGGTTGTGACAAAGCCGGCCAATGGCAGTGATGATGAGTGGACACTGCTCATGGAGGCTGCAAGGGAGGGCTCCCCTCCATCTGCCCCAGTCCAAGAACCAACACTGATGCATCCAGATCCTAAAATCAATGAGGCTCTGCACCAGATGCTGTCCATGGGTTTCACTAATGATGGCGGTTGGCTGACTCAGCTGCTGGAGACGAAGAATGGCGAAATCAGCCAAGTGCTTGACTCCATCAAGCCACAGAGAAGTCTTGATGGAAACTTTCATGCCTGAGCAAGACTCAGAGACGGAGAGACTCTTTATTTACACGACTTTATGCTTGTTAGATAGCTCAGTGTAATTCTGTTACTTCTAGAAACAGCATGTCTGTTTAACATTTGTTGTGTCATCTGTAGCTTTTGTCAGTAACTTTTAATACAGATTTTTTATGGCCAAAATTTGAATTTGTTGAATTGATGTATGGAACTTGAATATTTTTAAATCTTATTTGTTTTGGGTATCAAACAGATTTTTAGATTAGATTATTAAAGCATCTTCAGATTTTTATGAGAAGTTAATTTATGGATTTTACAATTACTGTTGTTTTGTTTTTTTGACCAAAATACATTGTGAAATCTTTTCAACATTGATATCTTTATAGATGAAAAATCTTGTTCCCAGTTTTCAGTTTAATATTTTATTGTTAGGTTTTTTGGCTCTAAAAATTAACCACAAGCTTATTTTTAAGTTGTAATTGATTTAACATAAATAATATATGAGCTAACTTCTTAATCTTGAGTATGGGGAATGATAAATATTACTAGTATAATTTATAACTGATTTTTGTCTTTGACCAGTTATTTTGTATTAATAATTTGTTTAAAGTAGAGTAGTACACAATTATACTATGTGTAATTGAAAATATTTTATTTATTTTACATATACATGTATATGTATGTAGTACATAATATATTTGCTTGAAAATTAATATTTATGGTGGTTTCAGTTTTATTAATTTGGTGATGCTTTTTTGGCTAACTTTTGAAACATTAGTTACATGTTTCTCACAATATTATATTTAATAAGATTTGAAAGACTTTAATGAATGGGTTTCAAAATTATATCAAATGGTACAACTGTTTTTCAACAGATTTCCACAGTAATGGTGTATAATGGTATATTAATGGGTTTCCTAATTAATTATATCGGACAGTACAACTTTTTTGAACAGACTTCTACAGTAATGGTGTATAATGGTATTTGACATCTAATGCTACAGTATATTTTCTGTGTTAACAGTTTTTACTTTTGTCCACATTGTTTTGTAAGGTTGAGTCCTGCAGTATTTATAATCTAAATCATCTAAGCAGTGTGTTTACTTGGTTTACATTGGATTTCTAGCTTTAGAAAACTCTTGTTGGGATTGTAATCAATAAAAAAAATGTGCTTAA

Transcript

ctg227-3.14-1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|PB1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00564	PB1	PB1 domain	Domain	Interproscan
PF16577	UBA_5	UBA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000270	Domain	PB1 domain	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR033741	Domain	Sequestosome-1, UBA domain	Interproscan
IPR052260	Family	Autophagy Receptor and Signaling Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15090	SEQUESTOSOME 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000423	Biological Process	mitophagy	Interproscan
GO:0005080	Molecular Function	protein kinase C binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007032	Biological Process	endosome organization	Interproscan
GO:0016235	Cellular Component	aggresome	Interproscan
GO:0035973	Biological Process	aggrephagy	Interproscan
GO:0044753	Cellular Component	amphisome	Interproscan
GO:0070530	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg227-3.14-1 global RNA-seq network