Gene detail

Detailed information of ctg20-3.8-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg20-3.8-1	PDZ DOMAIN-CONTAINING PROTEIN 8	chr6	26187757	26215042	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg20-3.8-1

ATGTTACAGTTTGTGATCGCTTTGTCGGCAAAGATAAAAGACTTCTTTGGATCGGTGTCGGGAATACTGGATCAGGTTCAGGTTGAAGTTGTCCTGTGTTCTTTGCTGGCGGGTGTTCTACTCACTGTATTTTTACAGTTTCTCTTCTTCAAGCTACGATTTGGACAGCTACCGGTGTTGCCTCCCCCTGTCAAAAATCAGTATCCCAAGATAAAACTACCACAGCTTCTGAAAGAACAGGCCACCAAACCAAACCTGAATGTTACTGAAAAATGTCTTTGGTTCAATTTATTGGCGCAGTTCCTCTTTCGAGAGCTCAGAGATACTCAAGAAGTTCGAAGATGGGTAATGCGGAAGATGAATAATGAATTCCAGGAGTTGCTGTCAACTCTGTCTGGAAAACTGATGGACCAAATCATTGTGAGAGATTTCAGCCTGGGTGACAACTTCCCCATTGTGAACTCTGTCGCTGTTACTAATGTCCTGGTGACTGATGATGTCATGGAGGAGCTGGATCTCTCTCTGGATGTTGACTACACCGGTGGGTTTCAGCTTGCTGTGGACGTGTATCTACTTTTCAATAAGTCGGCCTATCTGTCTGTGACCGTGAAGAAAATGAAGGGCAAGGCCAGGATGCAGTTCACCCGCATGCCGTATACTCATTGGTCGTTCTCATTCTATGAGGACCCAGAAGTTGATTTTGCTGTCGAGTCCCATTTTGATGGAAGACCTTTTCCTCAGATTGCATCACTGGTCATTAGCCAGCTTCGACGAAGTATTCGTAAAAAGCATACATTGCCAAATTTTAAGATGAGATTCCGGCCATTTTTCTGGAAGCCTGAGTCGTATGTACCTCAACGAGAATTAAAGGTCAGAGGTCAGAATATCAGTGTAGGTCAGCTGCGTGTGACTGTTATCGAGTGTTCCAGACTGATCACGACTCCCAAGGAAGCATTACTGTACTGCACCATATCAGTGGATAATTTGCCTTGGAAGGAGCTGGTCAGTACCCGACAAAGGGTTTGGAAAGCTATAGATGTGGAAGTGAACAAGGGTCAGACACAGTCTGTGGGGATGACTTTTAGAGAGGAACATCTGCTGGACAGATTTGAGGTAGTTGTCATGGTCGACAGCATTATCTCAGATTCACCAGCTGCTTTAGCAGATATTAGAAAGAATGATATTTTGATAGCAGTTAGTACTGCAAAGATATTTTCTTCAAAGCAAGCTGCTAAACTGATCAAAAATTCTGGAGAAAAATTCACCATTCGCATTGACAGAGCTCAGATGAAGATCTCACAAGATGTCAAGTTTTCTGAAGAAACTGTTTCTTTGAAGGATGTAGAGACTGAAGTGGATGAAGAAAGCAAAACACAGGACGAGCCTGATGAATATATACACATCAGCTTTAAAGTTGAAGATCACGATTCCAGGCCTTCAAAATCTCTTCTTGACCTTCCCAGCGAACCTCGGTTCAGGTCTAAGCGCTCAGTGTCTGAGGCAATGACGGGAAAGCTGGGTCCCATGTTACGAAGAGAAAGCTCTGACCCTCAGATTGGAACATCAGGAGCCGACATTGACACGCGGGAGAGATCAGAGAGTGACACCTGTTTGCTAACAAAGAGTCCTCGGTGGAACAAGGAAGTTACGTTTGAGGTTGGTGAGCAGCACCGGTATCTCAATCTGTGTGTCCGGTGTAAGATTCCAGAGAAAGTCGACAGGAGTGACAAGGTCCTCAAACCTCCAAGAGACCTTCTGCTGGGTCATGTTACTTTGTCTCTGAGTGATGTAGCTCTGCAGTGTTTCCGTACCAAAACCAACAACTTGGCCAGCCATCCTGGGTTTGATTCACACTTGTGTTATGGGGACATCACTCTGGCATTTCACTTCAAACCAATGAACCTGTCAGAGCTGGACAAGATAAAACTAACCAGACATTCTGTTGATCCGACAGTTATTGACACAAGCAGTAAGGAGAGCAGTCACGAAGATGCATCTTCAATGAAAACAGATCATTTATCACCAAAAGGACTTCATCATTTCACAGGAACACAGTTTCACGCGGCAACGTATTGTCACTTCTGTGGCAAGAAAATATGGATGAAAGTTGCATTCCAGTGTAGTAATTGTACTATGATTTGTCATAAGAAGTGTGTTGAAAAGTGCAACAATGACACAATTTGTACAGAAGCTGGACCAATGAAGCGTTGCAATCCATCTGAAGCCTGGCAGACGCCAGTGAGCACTAAGAAGAAGGGTAACCAGGACGACCGAGAAGGAATCAGTCGAACTGGTCGGCTGCTCAGCAAGTTCAGGAAGGAGTCAGCGTCTGCTGTTAAAATGGAATCTCCCAAATTTGTGAAAAGAACGGGTATCAGTCCATCAAGAAAAACCTCAGATCAGTCCATTACCCCTAATCCTAGTCCACGTCCTAGTCCACAGCCACCAAGGAAATTTCCAACCCTGATTCCTGATCCCGAAAGTGTGTTAGCAGAGGCCATGGGACCAGCAGTGTCGAAACTACAACAAGAAATTGACCAAGAGACCGAGAATAAGATGGAACTCTGCCTCGCTGCTAAAACAGAAACTGATCTTGCACAGCGCCAAGTTCTCGATATCAAGATGAGCAAATCAGATGAGAAGACTGAGGCGCTGATGATGTTGCTTCTTCACTACTGCGCAGGACTCCAGCACTGCATGGATTTGGAGGAGGAGCAACGGCAGAAGAGTGACATTCAAAGGGAGACGACTGCTTTTGAAGAGGCACCATCAGAAGAGAGCATACTAGATGAGACTGGTTTGTCAAACAAAGAAGAGGATGTTGGTGATGTTTGCTCGTCTGATATATGA

Transcript

ctg20-3.8-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF10296	MMM1	Maintenance of mitochondrial morphology protein 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR019411	Domain	MMM1 domain	Interproscan
IPR031468	Domain	Synaptotagmin-like mitochondrial-lipid-binding domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR039275	Family	PDZ domain-containing protein 8	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21519	PDZ DOMAIN-CONTAINING PROTEIN 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0044233	Cellular Component	mitochondria-associated endoplasmic reticulum membrane contact site	Interproscan
GO:0051560	Biological Process	mitochondrial calcium ion homeostasis	Interproscan
GO:1990456	Biological Process	mitochondrion-endoplasmic reticulum membrane tethering	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg20-3.8-1 global RNA-seq network