Detailed information of ctg1988-0.7-1 in Gigantopelta aegis Gene info
Gene IDAnnotationChromosomeStartEndStrand
ctg1988-0.7-1COLLAGEN ALPHAchr132127941521334759-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF05060MGAT2N-acetylglucosaminyltransferase II (MGAT2)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR007754FamilyN-acetylglucosaminyltransferase IIInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005795Cellular ComponentGolgi stackInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0008455Molecular Functionalpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activityInterproscan
GO:0009312Biological Processoligosaccharide biosynthetic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for ctg1988-0.7-1 global RNA-seq network
TOP