Gene detail

Detailed information of ctg1762-0.0-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1762-0.0-1	NECTIN-RELATED	chr12	6135306	6181956	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1762-0.0-1

ATGAGTGCGAATCGAAACATGGGGCGAAACGACTCGGTTAGAGGTCTTGTACTGTCGTCGAGGATGGTTAAATACATCGGTGACGATGTTGCAGTGAGCTGTTTGCCATGTCAGTTTAACAAGGAAAGCGGATACGAGATTGCAGTGTCGAGACTGGAGAATGAGACTGCTACAAATAGTGTTGTTCTCCTCATTGTTAAAGCTTCAAGCTCGACGCTGGATATCCCTGTCCGTTACAAAGACAGGATCACTTTCAATGGCTCACTCGAAAATCTTAACATTCGGTTTCTGTTGAAGAATGTTTCTGGGAACGACGCGGGAATCTACAAGTGCAGTCAAGGCAGTTCTATATCATGCAATACCTCGCTCATCGTTGTCGATACTCCAGGCAAACCTAATGTAACGAGTTTGGGACCTGCGGTTGTCCATCACAATGTGACCTTGGCCTGTTCTGCAAGGTCACGCAGTGCGCCTGAAGGTCATGGACTGAAGATGAGTTACCACTGGAAGATGGACGGAGAGCTGATACAAGATGGCCGCTATTTCGTGCGTGGTGGAACTGTGTCCTTTGAGGTTTCAAGGAAACTTGATGGAAACCAGTTCAGTTGTTCCGCTGAGGAGGAAAAACTTGTTTCCGAGGAAAGCGACCCATTCGCTATCTCTGTGGAGTTGAAACCATTCGCTATCTCCATGGAGTACAAACCGAGAAAGATACGATTTGAGCCCGACAGCAATGTCCGAGTCGTTGCCGTTGGCAAAGTGCTGGATGTGTTGTGTACCGCAGACTGCCGTCCTCGGTGCAGGTTGTCGTGGGTGAATCGCCAGACGAAGCGGGAAGTGGCCGGTGTGAATGACACCATGTTCAAGTTAGAGAGCGTGACGCGCAGCGACCACGGAAACTACACTTGTACCGTGCAGAACCAGCATGGAAAGAGATCGAGAAATCTGTTTGTTGACGTACATTATAACCCCATTATCAGCGATGTCGGTCTTCGGAACAACAAGACCGACTCCCTGAAGGAGGTGAAAGAAAACGACTCCGTGACGATCCAGTGTATTGTGGACAGCCACCCCAGTCCTGTTGTCAAGTGGTACACAGACTCGGAGCTGTTCCGAACTGATGACATGTCCAGCGCTCCACGACTAAGTTCAAGGTCAAGTTTCGCCCACACTTTTGGCAAGCAAAATGGAAAGCCGTTGACTGTGAATCTGGAAATCGAGTTGTATCCTCTCCATGACAACTATCTCTTGTACCAAGTCATCCACGGTGAGAGGCGGGAATCAGCCAACGTTGTCGTCACTCCGATCAACAGCGACACTGTCTACCTTCATACCTACGAGCTGATGTTTTTAGTTGACGTGAGGCTTGGTGTTGAGTCGTATAGCTTTATGGTGGAAAACAGTGAAGGCACAACTTTCATTGACTTCAATGTCACTCTCATAGGTCCGCCATTAACCCCGACAGAGTTTCTCGTGGAGCCTGGAACCGACTTTATCACTCTGTACTGGGTTCCTGGCTACTACGGCGGGTTTCCGCAGAGTTTTGTTGTCGCATACAAGACGGAGGACGAGTCGGAATGGAAAACTAAAAACCTCGAACTTGACCCGATCGACGGGGAGGGAAGAAACATGACAGCCGTGGTGCGTGGGTTTCTGTCAGCAACAGACTACTATCTACAGCTGTACGCGATCAATGTCAAAGGTCGGAGTGGAAACACTGAGGTCATCAGAGTCATGACCTAGTCAGATGTCGAGAGCACTGTAGAATATCAGAAACCATTTTTAGAAGAACCTCAAGTGAACGCAGATGGATCGACGGTGGATGAAAAAAAGGCATCAGTTGAAGAGTTGTATGCGGAAGTGAAGAAGAATCCCAAAATGACAGATGAAGAAACACCACATGATAATGGTGAAAAACCTCCGAAAGATGAAAAAGAAGAAAAGATGGAGGAAAACGAAAAAGCTCCTCTTATACCTGACAAAAAATACGACTCTGAGGAAGTGTCGCCTAGCAACAATAACGACATCCCTTCAAAAAAGGAGGATGTCGTGTATTCAGATCTTGACTTCTCAGCATTGCCGAGTGAAACCACGGAAACGCCTGTCATCTGTGGAAAAGAGAACGCGACGAATTACGATACGGTTGACTTCACAAAGAAAGCTCTGCCAGAAGATCCAGAACAAGAAGACGACTCGGCGTATGAAAATATGGTCATGAAAAAATAGACCGTCACTGTGATCAACAACTAAATGTTTCTGGCACCAGTCCTTTTGTAAATGTTTTCTTGCAAGTAGGAGTCTTAAGAAGAAAAAAAAATAGACCATCACTGTGGCTAGTAACTAATAGTTTCCAGTCCTTTTGCAAATGTTTTTTCACACGTAGCGGGGGGTTGTGGGGAGGGGGAACATAGCCCAGAGCGTGATGCGCATTCGGTGTTGGATCGATTCCCATCGGTGGGCCCGTTGGGCTATTTCTGGTTCTAGGCAGTGCGCTATGACTGATATATCAAAGGCTGTGGCATGTGCTATCCTGTCTGTGGGTTGGTGCATATAAAAGATCTCTTGCTGCTAATCGAAAAGAGTAGCCCATGAAGTGGCAACAGCAGGTTTCCTTCCTCAATATCTGTGTAGTCCTTAACCATATGTCTAACGCCATATAACTGTAAATAAAATGTATTGAGTGCGTCGTTAAATAAAACATTTCATTTCATTAATGAATTCGTAGCAATGGCCGTCTACTTCCTGAATGACAAGACCTATTAAGCAATGAAAAGGGTGCATTACCATCGAAGGACGTGCCATACAGTTTTACTGGCACCTTTCTACCAGTTAATTGAACTAAGGTCGATGACACTCACACTTTTGAGGAATTCCAATTTATAGAGGGTTTGTTTCGGGGAGTTTCATTGTATATTGAAATTGTTTTGAGGAATTCCAATTTATAGAGGGTTTGTTTCGGGGAGTTTCATTGTATATTGAAATTGTTTTGAGGAATTCCAATTTATAGAGGGTTTGGTTTCGGGGAGTTTCATTGTATATTGAAACTGTTTTGAGGAATTCCAATTTATAGAGGGTTTGGTTTCGGGGAGTTTCATTGTATATTGAAACTGTTTTCAATTATGAGACCCGCCCGTTGGTGAGAACATCATTCGTTACTTTGGTAATACATACTTGCTAACACATGTATCTTTGTTAACAATTTCAAGACATACGACTGGCTGCTTCTAGGTGATGACCAGATCACCAATGCCATACATCCAATGAAAAAACAGCACAATTGAAATCGATTACACTGTGACATATAGTTAACCAGACAATCATTTGTCTGTAATGCGTAAGTTCATAGGCTGTAAATAACTGTTAGTAAAAAAAAAAGATGTTAAAATTTACTTAAAACCTGGTTTTCGAGGATATGTAAGAAATCAAATAATATATGTACATTTGTGTCTGTTTATCTTACACAGGGCTCACACTGTCGGTAGCCAAATTAGCCATTGGCTAATTTTTACAAAAAATGGCTAATAAAATTTGCAAGTGGCTAAAATGTTGGCTACGCCATTTTCTGTCTTCTGATGTGAACAAATGGAGACATAATCTATCCGTCACCTCAAACATAATAATACTACCAAATATTCAATTAGCATAATAGCGATCTCGCAACCGGTAACGAGAAACGGTGTCATGCAGAATACAGCGTAGGCCTTATGTTTGCTTATTTTAATAATCACGGTTATTAATTTTAACGGCATGCATTAAACATTTAGCCTATGACAGCAATGTCTGGAAGATCTGTAACTTGTTATTTTTAATTTGTAAAATCTTTGAACCAAAGTAATAAAAACAGACCGACAATGCGTGTTAATTTGAATACACATGCCAGTTCAGGGCCAAAAGACATGTAGGCCATCTCAAGGTCTGAGTTCAGCCAGACCGAGCGAAAACAAAACGTTTCTTAGACTGGTTTGTGCGCTTCACGTTAAACCAAATGGACACGACAAACATCAATCAAATAGTTCGCGAACGTTAGGAAGAACGTTTGTTGGCTGAACTGAGGACAGCTCTCAGTGCGAATATACGTCACGCTTCAGAGTCAGCTGACACCCACGTGTCAAAAGACATCGTTGCGGACATTAAACAATATGATTACACAGAAGTAAATCTTGATGTAAATTTGTAGAAAAGCAATAGTTGTTCGCATCAATGAATACCTAACTGCATTTTTTGTTTATTCCTTTGTCTTTGTTAGTTTCGTACCCATGGTCAAGAGCACACATGCAGATCGCAATTAACGGAAATGAACATGCAGTATTTAAATTATACAAATTGCAGTTAAATGTACACTGAATAAAATTAGTTTACAGTAATCATATTTACAGTAATCATATTTGTTAGATCATTTTCGATATAAATTTGTAAGACTGTGAGGTGACATTTAATAAGTTAGCTGGATTTTAAAAAGACCAGTAAATTTTAATTTTATTAAAGGATTTGTTGTTGGGTTTTTTTTGGGGGGGGGGGGGGGGGGTGTTGTTGGAAAATGGAGTATACTGTGGTGAAGTCGGCATTCTTAGCTGAGGTATTTTGTAAGCAGAAATCACAACAAGCATTTAACACGACGCTGAAATCAACAGCAACAATATGGCACAAATTATGAAATCGTTTGAGGTGGGGAATTGATGGGTCACTTAAAAAAAAAAAAAAGTTATTCAAACTAACATAAAGATTGCTATTTAAAGAAATAACGAGTTCTATATAAAAAAAAAAAAGTAAAAAAAAAAGCTCTCAAATTTTTATTTGGGAAAAAAGAAACAAAGAAAAAACAACACCATCCATAAGCATCCACCCACCCCCATATTTCTGTATGTTTGTTAATTTAATGTCATAGGCCTTAGAAGTGGGGGTGGGTGTATGGGGTACTGGCTTCAGACTGAAGATATTGCTTAACCCCATCCCAACCCCACCCACGCTGAAAAAAAATGAAGTAATATATTAACTGCCCCTACCCCCATTAAGGTTTTGTTATTCCCATTTATTCCAGTTTGTATACAATTAGCTGAAAAAGATACATTTTCATATTCATATATAAATACTCTATACAGTACTGCGTAAAACAAATTTGGCTAAAGCATTTTTAATATGGCTAATAAAAATTCCATTTGGCTAATATTTTGGCTACAGGTATTTTTGATCCAGAGTGAGCCCTGTTACAACTCGTTGAAAAACATATCCAACTCGCTTTCGCTCATTAGATACATTTTAAAACGACTAGTTGTGAGATAAATGGTATCTAACGGCCGCTCATGTAGTATTCTCTATATAAACAACTCGTTGTGAGATAAATGGAATCTAACGGCAGCTCATGTAGTATTCT

Transcript

ctg1762-0.0-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051427	Family	Nectin and Nectin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23277	NECTIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1762-0.0-1 global RNA-seq network