Gene detail

Detailed information of ctg16-13.24-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg16-13.24-1	COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED	chr6	52549545	52582226	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg16-13.24-1

ATGCTCGTAGGACTAGTTTTAATATTTAAACAAAACTATTTCAAAGAATATGTGCTGTATCCACACAATGGTGACGTTCCAGAGAGCAAGGCTAGTGTTTCAGTTTGCGCACTTGTTGGAACGTACATCTGTGGTCGTGTGACTACCTATTTAAGTTTTATCTTTCTTATTTTTATTGGCTTTATCCTTTGCGCACACTGTTGTTTCTCGTTCCCAGGCAGTACACAAATTGGCATCTACTGTGGATACGATAATCCTAAAGTCCTCATATCGTCTTCAAATGGTTTGTTCCTACAGTTCAAGTCTGACAAAAAGTTTGAAGACAAAGGTTTTAAAATACAGATCGAGTTTGTGACCGAAGGCGAAGACAAATCTTATAAACAGCAAGGTAGAATTGGAATGAGCGTATTTTATATATTTTCAGATTGTAATCAAACTATTTCAACACTGGGTCACAATCTGACAAGTCCCACTTCTGCCACCAATCTGTACATGCAAGGACAATATTGTATCACGAAGCTCACAGCTCCACCCAATCACAGAGTTATCCTTCATTTCGAGGTTATTGATATTGCCAAAAGTGTGGAATGCCACTCGGATTATTTGACAATCAGAGATATGAAAGAATATTACCCAAACTTTGTTAGAATTTGCGGTCATCACGACCCAGGCCTTATTGTCGTATCCAGAGGAAATCAACTGCTGCTGGAATTTACAAGTGATTGCAGTGTTGAAGCGAGGGGATATATTGCAGACTATAATTTTATTAAAGAATCAGATATAGATGATTATATAGATAACGGCACTGCAGGTCAACTTGGTATTCTACAGCAGCAGTGTTTTGCTGGTGGTATGTGCTACAATGACGGTGACGGAAATAAATGCTTATGTCCAGATGGGTTCGTACCACCAGAATGTACAGAACGGCTGACGTTCATAGAAACAACAGAAAACCCTTCAGTTAAATACTTAGAACGTGTCACTTTGAAGTGTCGAGTGAACCACCCGCATCCACAGATAGTATGGTTCTTGAATGATTCTAAAGTGTTCGCACACTGGCTACCTCATACTATTAATGAACATGGTGACCTCATTATAGACATTGCTCAGCCCATTCATCAAGGACGCTACACATGCGAAGTCCGAGCCAGCGAAACGAAAACAATATGGCTAACTGTCGAAGAACAAGTGTTGACGTGTGGTTCGAACATCACATTAACCAATGGCGACGTCCAGTTTATATCCAGCCCGAGCTCCATGCATGGGTCATATCTAAACAGCGTCAACTGCTTGTGGCGCATAAATGTCGCACAGGGATACAGGATTTTGATCGCCTCCAACTCAATACTGCTGGAACCTAGCTGTGGCTGTCGGTATGATTACGTGGAACTGTTTGACCCGGGTTCCAGACATATCGTTAAGATAGGTCGGTTCTGCTGGGACAGACCAGTACAGTACATCTCTACAGCTGACACCATGCTGGTTCGGTTCCAGTCGGACGATTCCGTCAATACGACGGGCTTTACTTTTAGCGTCAGCAGGGTCACACCTGCCAGCCCAAAGATTGGGAGATACTGTTGGCGTAGCAACCCTCAGACGATCATTTCGTCGTCACATGACCTGTTCCTGCAGTTCAATTCCGATGGTCGCGTGGAAGACAAAGGGTTTAACCTACAGATTGATTTTGTGACAGAGGGCCAGGACACGGGGTTTACGCTTGTTGATAATCCAACCCCGGAATCGTATGATCCAGGCCCAAGTTCCATCAGAATGTGTGGTCACCATGACAAAGGCTTTAATATCACATCTAAAGGGAGGCAACTACAGCTCGAATTCGAAAGTGACTGCAGTATTGAAGCTAGAGGATATTCTGCAACATACGAGTTTTTAACTGGAAGTACAGAAGAGACAAGTATGAAGTTTCTGGACTTCACGATACGAACAGAAAACTCTACAGTTGATCAATCAAGTGATATCATTTTGAAGTGTCGAGTGAACCACCGCCATAGGATGATAGTATGGTCTTTCAATGATTTTGAAGTTTACACGTCCTCGTCAGTTTATAAGATAGACACAAATGGTGATCTTACGGTGCGCAATGCGCAGTCCAGGAATACCGGAAAGTACACATGTGAAGTGTTAGCAAGTGGAACAGTCATACAACACTCAATATGGCTAACAGTTCTTCAAACGGAAGGTTACGGAAGAAACAGTAACAGTTACGACCATGACATCGCCTTGATCCACCTGCAGGAATCGTTTAAGTTTACGAAATCTGTTCTTCCCATTTGCTTGCCAGCTCCAGGCAAAGCAGTATTGTTAATGAAACCAGGCATTAAAAGCGTCACTTCCGGTTGTGGCCTCACCGAAAACTACACCCAATCAGAGATATTGAACTACGTCAAGGTGCCGATACAAGATGCCACAACGTGTGCGAAGTCTAACTCTATTGTTAAGACATCTCCTGGGACAGCTTTCTGCGCCGGGTACGAGGAACAGGGTCTAGGAGACGCGTGTAAAGGAGACAGTGGAGGGGGGCTGGTCGCTCGGGAAAAAACCCGCTGGTACTTGATTGGAATTGTGTCCTACGGCGAAGACTGCGACAAACATGGCAAATATGGTTTCTACACAAACAAAGCAGACAAAGAACCATCTGACAATTTCAGAATTATCGGCGGAAAGGAAACTCATCTCGGCTTGCTTCCGTGGGTGGCTGGACTGGAAGATCCGGCTGCACGTAATTCGAATTTTGATTGTGCCGGCGTCATATTGGGAGAATACTGGATAATTGTGGAGTACAAGATTTGGCCCTTATACATTTACAAGAAAACAAAGGGATCAAGTTCAACAAGTTCATTCAACCCATTTGCTTACCTTCTGGCAATGCTGAGTATCCCGGAAGTGAATGCATCATTTCTGGGTGGGGAAAGACAGAATCAAAATCTGAAAGTAAAATCGCATATAAACACATTTTGA

Transcript

ctg16-13.24-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00089	Trypsin	Trypsin	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR001254	Domain	Serine proteases, trypsin domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR043504	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24255	COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg16-13.24-1 global RNA-seq network