Gene detail

Detailed information of ctg1522-2.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1522-2.5-1	EGF-LIKE DOMAIN-CONTAINING PROTEIN	chr8	15594382	15625056	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1522-2.5-1

TTGCTTTGTGAGATTGAGGTGCACGGTTCTCTTTGTGAGATTGAGGCGCACAGTTCTCTTTGTGAGATTGAGGAGCAGGGTTCACTTTGTAAGATTGAGGCACACGGTTCTCTTTGTGAGATTGAGGCGCACGGTTCTCTTTGTGATATTGAGACGCACGGTTCACTTTGTGAGATTGAGGCGCACAGTTCACTTTGTGAAATTGAGGCGCACGGTTCACTTCGTGAGATTGAGGTGCACGATTCTCTTTGTGAGATTGAGATGCACGATTCTCTTTGTGAGATTAAGGCGCACGGTTCTCTTTGTGAGATTGAGGCGCGCGGTTCTCTTTGTGATAATTATGACATAAACACAAACGACTGTCAAAACCAGTGCTCTGATGATCACTCTTACAACTGCACAGATCTTTTACAAGACTACATGTGTAATTGCAAACCTGGGTACACTGGAAAAAACTGCACAGAAGAAATTGATGAATGTCAGCTGCTGCCGTGTGAACATGGTGGGAACTGTACTGACCGTGTTGCAGATTTCACGTGTAGCTGCCCAGATGGATGGGAAGGGAAGACCTGTGCAGATCCGTACAACTATTGTAACAGCACTACGTGTGACAACAACGGAGCCTGCTACAGCCTCAAGGATACGTTTTACTGCAGTTGTAAGGCTGGCACCCAAGGAACACGATGTGAAACCTCTCCCCCGGTGTGTAAACGTATCGATCCATGCACAGACAAAGGCAGATGTGATGAATCGGGAGGAACTGCAAACTGTACTTGTGAGAAAAATTATGCTGGGGTGTCGTGCCAGCTGATTAAAGATTCCTGTTCTGCTGATCTTTGTAATCCGGGAGGAAGCTGTAAAACTCAGACTGTTGGCTACAGCTGCGAATGTATGGATGGCTACCAAGGAGACGATTGTGAAGTAGAAAGCCCACTGTGTGGTAGTGGTGCCTGTTCATCTGGACAATCCTGTGAGCAAGAAGGGCGGGTCAAGTACTGCTTGTGTCCTGCTAAACAAGTGTCTGTGGGAAGCGCATGTAAAGATGGTTCACTTGACTTTGACCTGTTGTTTGACAAGGGCATGGTGTCTGATGATGTGTTGTCTGGACAACCTTTCAAGTTTAACAGTGCTGGAAACATGACAGTGATGTTCTGGATTGGTCTGTTGACTGATGTATCAGGTGGAACTGTCTTCAAGATCAAAAACAACATGGACAGTACAACGTTCCTTGAGGTTAAGACAGACAGTGTAAGTTTTAAGGGGAATGAAATCGCAATGACAGTGTCTGCTGGCAAGTGGAACCACATTGCTATAACTTGGCAGCCAGATGGAAAGTATGAACTGATCATTAATGGTATTAAAAAGAATGGTGACACTACACCGCCTGCATTTCAAGAGAAATTGGTAAGACTTATGTTTGACAGCCAGTTCATTGGATATGTGTCCCAGCTTACAGTGTGGCGAGACATCTTACTTTACAATGAGATACTAAAGGCCATTACTGATCCAAAGTATCTACCTTCATTTGACCTTGCACTTGGATGGTATGACTACAGTTTGACAAAATCTACCTGGAGACTGACACCAAGTCAAGCAGTGGCTGAGAAAAAACTGTGTGATGCACAACGATTCATGGACTCCACATGTGATAACAAAATGGGTGATTTACTTACCTGGGGTGCTTACCAACTTGTGTATGCTGCCACAGATAAGGCTGGCAACATTGGAGACTGTCGATTCAAACTTTATGTGAAAAATCAAAAAATTTCACAAGCAGAAATAGCCCAAAAAATGGGCTGTTCCCAGTCACAGGTATGCAGAATTGCTGGCAAACGAGAGGATATTCGCACACGATACGAGTGTAATAAAATGAACCCCGAACGAAAACGGCTACGATCTGGCAAAGCAGAGGATGTGGAGGGCGCCTTGTCAGAATGGTTCGATAGTGCCAGGTCCAGAGATATCCCTGTGTCCGGTCCCATTCTCGCAGAAAAAACAAAGGATTTGGCGAAACATCTCCATAAAGAAGACTTTAACCCCACCAACGGATGGTTTAGTAGATGGAAAGAAAGACATAACATTGTCTACAAACGACTGCATGGAGACGGAACATTAACTGTAAAATCGGAGACAGTGAGTGGGAGCAAAAAGGCGATGGACAGGGTGACGGCAATGATAGCCTGCAACATGTCGGGAACTGACAAACGAAAACTTCTCGTCATTGGAAAGAGCAAACAGCCGATGTGTGTTTCAGAGGGAAAAAGAGTCTTACTGTGA

Transcript

ctg1522-2.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001387	Domain	Cro/C1-type helix-turn-helix domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR051830	Family	Neurogenic locus notch homolog	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24033	EGF-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1522-2.5-1 global RNA-seq network