Gene detail

Detailed information of ctg1259-0.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1259-0.3-1	CARBONIC ANHYDRASE	chr6	55859508	55892455	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1259-0.3-1

ATGCTAGAAAACAATGGTCACGACATTACCTTCACCGTGTCGAACCGGTCGCGCAGTGTGAATCTGACCGGAGGACCGCTGTCGTACCGCTACAGAGTGGCTCAGATCAGACTACACTTCAGTACCGACGATCACCAGGGCTCGGAACACACCATCGACGGCAAGAGCTTCTCTCTCGAGTTCCATATCGTCGCGTACAATGCAGATCTTTACACCAATCTGTCGTACGCTTCTAGATCCCCGCGGGGTATTGCAACACTAGCCGTCTTTGCACAGGTTTCAGACACGGGCCATTCAGAATTTGGAAAACTTACTTTTGCTATGAACAGAACAAAATATAAAGGTGATAAACAGAGAATCAATTTTCTTCGTCTGACAAAATTTCTTCCCGCCACATCGCAATATGTGACGTATGACGGGTCGCTCACATATCCGGGCTGCTTTGAGACGGTCACGTGGATAGTGCTGAACAAACCAATCTACATAAGTAAAGAACAGTTGGACGTCCTGCGCAATCTGAACCAGGCCGGCCGGGAGAACCCGCAGATGCAGTGGATGAGCAACCTCCGCCCCCAGCAGGACGTGAACCAGCGCACCGTCCGCACCAACATTAACTTTGAAGGTACGGTAAATCGCCACCGAGATGCAATCGCTCTGTTTCTGTGTCGCTTCATCAACACACCACGGTCGGACAACTTTCGAGAACAACAGCAGCATGGAATATACACGATGACGTTGGTGTGTCTGTACATCCTAGTGTTATTAACAATACAAACTGTGAAAGCTGTAAACCTGGCTGCTGGTAAACCGGCCACTCAGAGTTCGGCCCACAGGGTGCACACGACCGCGGACAAGGCCGTGGACGGAAATGCGGACAAGGCGTACTCCCATGGGTCGTGCTCGCACACCAACTGCCAGGACCGCGCGCCGTGGTGGATGGTGGATCTCGGCAAGGTGTATCTCATCAAGTCCGTCACAATCGCCGTCGCAGATAGTGCCAGCGGGCGGATGAGAAACTTCCGGATCGAGTTGTACAATAAGCACCCCAACAAGGGCGGTATGGCCAAGTTGTGTGCGTCACAGGGTCCGGCAGCTCTAGCTCACGGCAAGGACAGAACATTCACGTGCTCGCGCCCCACCAGAGGGCGTTTCGTGAAAATATCGAAGAAATTCACCAGTCACTGCGACGCTCTCATCCTGTGCGAAGTGATGGTCAACGGCGAGGAAGTAGTTAACTGTCCTTTCAGTTTTGTGAGACATGGTCGGTCATGCTACTTCTATTCGGAGCACAAAGCTGGGAATTGGTTCCAGGCTCGAGATATATGCAGAGCGTTAGGTGCCGACCTGGCAATTGCGGACAACAAAGAGAAAGTGAAGTTTTTCAAATCTGCTCTTAAATCGCTGGGGGCATTAGGAGGTCGCATATACTACCTAGGCGGCCATGCGTTCAGTGGGCAGGCCTTCCGCTGGCTGGACTCGAACGCGCTTTCCATGGGGGTATTCGACGACTGGGACAAAGCCACGAACCCCAAGGACCCGGAGCCGAACATAGAAGACGAACTGTGTTTTGGTATGCACAGGGAACACTACTACACCTGGCACAACATCCACTGCTCCAGACGGGAACAGTTCATCTGCGAAAAAAGCCCCATGTGGCCTAGGCCTTAAAGATGCACTCTCGATAATATTTTTATTATTAGTTACTATCAGTCTAACCTGAGAAGACTATAGGTTTCTTCTCCGTTCTTCTGTCTGTCTGTCTGTCTGTCTGTTCGTCCGTCTGTCCTAAATATAGTTTTCCGGATGCTTTTCTCCCACAATGCCTTGAGGTATTGTTACAGATCAAGTTTGACTTTCATAGCGACTTTCAATGCCTCAAAATATTGAGTTGAAATTTTTTGAATAGTTTTATTATGATCTGTTACAGATCAAGTTTAAGATTTATGGTGATTTACTATGTTTTACAGAGTTATGGCCCTTGAACTTAGGAGACACGGAAATTAGTTTTCCGGAATTTTGTTTTTCAATGATTAAAAATATTGAGCAAAACTTTATGTATATCTTTATCATTATCTGTTACAGATCAAGTTTATTCATGGCTATTTACCCATTTTTCACAGACTTTTGTCCCTTGAATTTAGGAGATACAGAAATTGGTTGGACCCAGTCCGGAAACATATATTGCTTTAGCAGTACCCTCAGAATGCTTGCTAAATATTTCATCATTTTCGAATGGATCATCCACATTAAAATTCTTGTTGTAGTACACTATTTTTAAATATATGTTGGCCATGCGCGTTAATCTAAGGGCCAGGATTAACCTCAGTCGGTGCCTGGGTTCGTAAGTTCGAGCCACCCTGACGGACCCATTGAGCTTGTTCTTGTGGGCAGGGGCTTGGTCCCTCCTAAATTTTGCGACAGTTATATATGGCGAAAACCAAATGTGCACGGACAAAATATATATGCAGAATATGCAGAATGAAACGTTAAGTTAAGAAAACAAACGTGGGTTATCAATTCTAAATGTTAAAATATGCAAGAGAGTGTACCTTTAAGAACGCGGGTTTACCGCTGATCTAGGTGTTACGCGGGATTGAGTTTCAACGTATATTGCTACTGTAACAAATTGAGTTTTGTTATTGATTGTATTATAATACACTTTTGCGTTCCTTAGAACATTATGCTATATTTTAGTATATCATGAAACGGACATTTTCATGACAAAGAAAACCAGAACAAAACAAAACACAATGAAGGAAAAAAAGAAAGAAGAAAAACAGAAAAGAACGATTTCTGCACTATGGATGTTATG

Transcript

ctg1259-0.3-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF00194	Carb_anhydrase	Eukaryotic-type carbonic anhydrase	Domain	Interproscan
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR001148	Domain	Alpha carbonic anhydrase domain	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR006585	Domain	Fucolectin tachylectin-4 pentraxin-1	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR023561	Family	Carbonic anhydrase, alpha-class	Interproscan
IPR036398	Homologous_superfamily	Alpha carbonic anhydrase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18952	CARBONIC ANHYDRASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004089	Molecular Function	carbonate dehydratase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1259-0.3-1 global RNA-seq network