Gene detail

Detailed information of ctg115-4.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg115-4.5-1	ANTIGEN BSP, PUTATIVE-RELATED	chr6	64639222	64650318	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg115-4.5-1

ATGTGGCGAGGCAAACAGCTTCAAGTTCAAAGGGATAACTACATGAACATCACATGTGAGCTGCACCAGCCATTTGATGAGGATCGTCTGAAGTGTCCTGATACTGGAGCTGAAGTGGTAGAGGAATGGTCTAAAGCCTTCAGTGATATGATCAATATTGATGATGTTAATCTGTCTGGAAACAGAATTCGAAGCATCGAAAGTGATATTCTTTTTGGATTACACATGGCCAGAATGCTGAACTTCAGCATGAATGAGATAAACAACATTTCAAATGGAGCTTTTCAATTTATGAAAAATCTCAAGATTCTTGACTTCAGCAACAACAAGATAAATGTGATTTCAATAAAAATGCTACAAGGTCTCAAATCTCTGACGTCTCTTCATCTTGAAAACAACAAGATCCACACAATTGAACCAGGGTCATTCACCCACTTGGGTAGTCTGCAAGAACTTGACATGTCGAGTAATAAGCTAACCACCCTGGATAAAGATGTTTTATCTGGACTGTCTAATCTCACTACTCTTTCATTGCAGGACAATTGCATTAAAGATATTGACCTTCAGTTCATGGACAATGCTGAAAACGTTATTGTTCTAAGACTGAGTGGCAACTCCTTCCACAATATCAGCATTCCAGTGTTTACGATGCTTAGGAACCTGCAGGAACTCTATCTGAGCAATATGCCTTGTCTTATCACAGTCGCCTTCAACGCGTTCCATGGATTATCCACCCTGTTGACCCTCGACCTCAGCCACAATACGAACTTGTCTTTTATCCACCCAGATCTGTTTGACGACCTGCAGCAGCTGCTAGTACTTGATCTCAGTCACAACAATATCTCTATGCTGTCTGAACTCACATTCCTCCACAACAAACATCTTCAGCAGGTCTTCCTGGAAGCAAATGTGTTCCAGTGTACCTGTGGCATTGCGTGGCTTGCCGGATCTTTACTTGTAAATATTTCAGTTTTCAAAAGTGAGAACCTAGAGTGTGCCGTTAATGATACATACTCCATTCCACTCAGTATGTTGTCAGGCTTTGAACTGTGTCCTGCACTGAAAGAGAGCAATGTAACAGAAACAGAGGTGGTCATGAAGCTTGCCCATCCTTGTAGACTAATCTGCGAGTTTGTTCCTGATCCAATGACCATGGTTGTATGGAAAACTCCCCGCCAAGAAATCTTTACCTACCACCCCTTTCACCCACAAGCAGCATCACACTTGCTGAGCACTAACATAACTGACCTACACAGCAGTTTTCATAGAAACCATCCATGGCATAACGACTCTGGATACTATTCTGATCTTGAAGGATCTTCCGATCACATTGTTCTGTTGTCAGATGGATCTCTTTATATCGATTACATTTTACGCAAGGATGCTGGTCCATATGAATGCTTAGTCCAAAACAGTCACTACAACTCATCTCAGACCGTGACCATCAGACTTGTATGTGCAATATTCCAGACTAAAATAACCAGTTTAATTGTAGGTGCTTCAACTGCATTGGTTTTCCTAGTCCTAACTATCCTGTACAGTATTATTATGATTGGGGCACAGCGCTTGATTAACAAACGCCGCAGAGATGCAATCCGGAAGCTGCTGGAGAACTTGGATACGTACAAGAACATGCAGTTCTCCAGACTGCGTGACAACTACAGCAATCAGCTTGGTCGAATCAGGGACCAGTATCACTTGCAGTTTGGAAGGTTGAGAGAGAACTATGCTCTTCAAATGAAGCGGGTTCGTAAGGGATATTCTGACAAGGTGGACAGGATTCGAGACAACTATACGTTACAAGTTATAAGACTTAGACAGTACAGTGCTCATCAAATAGAGCAAATACGGGAACTGTACAACAATCAGCTCCTCAGGATTCGCGATTACAGTTCTTTGCAAATGGGACGAATGCATGAGAAGTACAAACTTCAACAGCAACATGTTATAAAGTTGTTAGAAACTATGAACTTGGATAACTGCAAGAATTTGATAGACACCGAGTGCATGAGAGCTGAATCAAAGATATATGAATTAAATATTAATGTTGATGATGATGAACAACCCCTGTCTCCTTTAGAAAGTGATTCTGAATATCATACAGCAACAAGCTCTGAAAATTCAAGTCACGAGAATTTATGCATCCCGGTAGCTATCTGTATAAATGAGAACATCGGTGGAACTGAAGATGATTTTTTTTCACAAATCGTTCAAGTGGAACCTAAAGCAGGACCAGACAGCCCAGTGTTATTCATGAATAATGGTATAAATTGTATGGATGATATAACTGAAACAATTGTCTGA

Transcript

ctg115-4.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00560	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050541	Family	Leucine-rich repeat and transmembrane domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24369	ANTIGEN BSP, PUTATIVE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg115-4.5-1 global RNA-seq network