Gene detail

Detailed information of ctg1136-1.7-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1136-1.7-1	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	chr12	35392362	35418976	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1136-1.7-1

CTCACAAACGGCTAATCTAGGTCATAAATGCCGCATAGTTTCAGCTAGGGCTTTGTCTGCAGGTGCCCGTGACGTCATGTCACGTGACTGGGTGGGCAGTATCGATAATTGACGCGCGCCATTTTGACGAAGAGTGACAGTGTCTTGATAGAAGTGCAATTGGTGGTGGCGGAAAATGTCGGTCGTGTCACAGCCACCCACATACCAAGAGGCGCACATGCTAACACACGGCCAGCCGATTACTTCGTGTTCCTCCTCTAATGTAGATGTTGCCAGTGTTGGTTCGACAGTGATAACTGTAGCTACCGGAACGGTGGGTTCAGCTGACGCCGAGACTGAACAGACAGAAAACTTCAAACAATCCATTTACAGACACCCATTGTTCCCGCTGATGGCGCTGTTGTTTGAGAAGTGTGAACAAGCATCGCTGTCTTCCGACTGCCCGTCTTCCGACAGTTTTGATGTTGACATTCAGGCGTTTGTTCGCCACCAGGAATCCGAGCGGAAACCGTTCTTCAGTGATGATGCAGACCTGAATGGTTTGATGGTTAATGCAATACAGGTGTTACGAATACACTTGCTGGAACTCGAGAAAGTGACAGAGTTGTGTAAAGACTTTTGTACGCGCTACATTGCCTGTCTGAAGGGGAAACTCCACAGCGAGAACCTGTTGCGCATCGACAACCAGTATGATTCGGACTCCGACACACCCACAACTCCCGGCCCCTCCCCCATGCAGATGTCACAGGTCATGGGGTCAGGGGTCAACGGAAACGTAGTCCTACAGCAGACGCTGCCGCAGCCCACAGTTTCCATGGCAACGATTAACCAGGGACAGATCGTGTCGGGCAACACGGTCTACCAGATGGTTCATACGCCGCAGGGCATTGTGGCTCAGCCTATCCAGATTCAGACTGCACCTTTGGTCCAAGCGCAGGTTGCACAAAGTACAGTTATACATGGGAGCACCCCACTTTCCCAGATAGGGATGGTCGGTACCCCTATTCCAAATCAGATTACACAAACAGTGACATCTCAGCCTCCAACCTCCACTGCTAATCTTTCCCAGAATGCAATGGCATTTTTTGAAGAAGACGACTCGTCAGGGAAGAAGAAGAACAAGAGGGGCGTTCTACCTAAACAGGCTACTCAAGTGATGAAGTCCTGGCTTTTCCAACATATTGTGCCCATGTTGGATGCCAGCAATCCAGACGTTACCAAAGTGAAGAAAACGAAACCTCAAACGAGACCACAGCAACGGTTTTGGCCCGAGAGTATAGCAAACCTACAACCGCAGTTACCTCCCCCTGTGGAGAGACAAGACGGTTCATTGGACGAGTCGGAGTTGTCGAACTCTTCTCAGAAGGAGGTGATAGATGCGTCTTCCATTTCTCAGAATCAACAGATTCTGTTGCCTATGATGACGGCTGATGGACAGATCATACAAGTGAACACAACGCTAGGCAATCTGCAGTCGGGCTCCATGCCAATACTCGCCCAGGTTGCCACGACGATGCCGCCAGTCTCTCACAAGACAGAAATGGAAGAAGTGATATCCAGTGCCTCCGATGAAGGATGAACTGTAGTGATGACTGCATATGTGTTTTTTCTTCACAATCCGATGCCCTGCCATCGACCAGCGGACATGGGTGATAGTATATAGCACTCTATAGTGCCGTCCTGCTTCAGTATGCCCTAAACATTTGGTGTACTGGAAGGAAGCTCCATTACCATATGTTACCAGAGAAATATGTGGGATGTCAAGGCTGTATGAAGAGGATAAGTGTGTGTGTTTGTGTGAGTTTGGGGGAACCCATGATATCCTCCCCACCCTCTATTAAAGGGACTGTCCTGAGTCTGCAGTCATTGTAAGCTGTTTGCGATAACAGAGCCTTGTTTGTGACTACTATTTCATACTAAATACATTTTTTTTTTTTTTTTTTTTAGAATACCAGTGTCAGCATATCAAATGTGTTTGTGGTCGTATACCAATGTTTGTAGCACTCAGTTTTTACTTTAATTTGTGATATATATATTTTCATAGGTACATATTTATTGGGAGGTAAAATCTGGTTTGGATTAAACTACTACAAGCATTAGGACAACAACAAACACTTTGTAAATACAGACACTGATATTGTAAATAAGAAAATGTATTTAATTTGTCTGTTACATCATCAAAAGCTCTATTGGTTGGAAACATTTTACAATGGTTGTAAACTCGGGACTGTGCCTTTAAAGAGACATGCCCTAGTTTCAACCCGTGAAAATTAACACTAAGTTCAGTTAGTCTACAAACCTGTAACACAGTTGGATAAAGTTATAAATGAGTGAAACATGACTGTGACTGAAATGGTGAAATACCCTCTAAAAATAGACTAAAACTGGGCTCCATAGCTGTTACTTCTCAGATGCATGTGCGTTTTTAAAAATACGAGAAATGCATTATGTGATATTAAAAACAACAGGTTGACCAAAAACACTTCAAATGTATGGAAATGGATAATCTAAACAATAAAATCTAAGTAAAGTATGATTTCAGTAGTGTTTAAAAACTAGAATATGTCCCTTTGAAACATGGTTTTTTTTTTGTCTCGCCTTTATAAAGTAAAAAGAGGCGGTGATGAGGTCTGAAGTTTCGTGTTTAGATCAGTTTCTCAAAAGCTATAAATCCTAGGGCAGCAGGCTTTCTGTTGAAAATAATTTAAAGGGACATTCCTGAGTTTGCTGCAATTTTTAAAGATGTTATCGACTAATAAAATGTTTCTACGATTAAACTTACATATTAAATATATTTTCTTATTTAGAATGTTAGTGGCTGTATATTAAACGTGTTTCTGATTGTTCTAATATTTGTACTAGGTTTCATTTTATTTCCTAAAAAATAATTTTTTCTTACCTACGAAATTATTTGAAGACAAAATCCAGTTTGGGCTTCTTACAAATACTGAGGTGACCAGAAACACATTGAATATACACCGATATTCTAAACAAGAAAATATATTTAATATGTAAGTTTAATCATAGAAATATGTTATTAGTTGGAAACATCTTAACAATGTAGCAAACTCAGGAACGTCCCTTTAAGGCTACACAATAAAAATAAAATGGATCATAAGTGCGCCTTCACATAATTAGAATTGAATCATACCCGTAACATATTCATTAATATAGATATGGTTTTCCATCAAACTCCTGATGGGCTTATCATGTACCTCACCGGTACTCTTGTTTAAAAATATCAGGCCAAAAACAATATGGCCAGCTAAGAAAACATATAGCCTGCCAGAAATGAGACAGCATGGGGGAAGTGAAGGGTTTGGAACAGTGTGTGAAGAAGATGTATTTCAGAGCATTATATAATTAAAACACAATGGAATCACGAGCTCAGCCTATATCTATTCTTTCAACTTATTTTCATGCTTATATCCAATTAAGGTTCAAGCATGCTGTCCTTGGCACACACGTCAGCAATCTGGGCTGTCTGTCCAGGACAGTGGGTTAGTTGTTTAGTGGTTAATGAGAAAGAATAGGGTGTAGTGGCCTTACATTGAACCCTCAAGAACTGGCTCTGGGTTGGAGCTGGTACTGGGCTGTGAATACTGTACCTACCAGCCTGTAGTCCGATGCCAGTATATATATATATGTATTATATCTGATATAGTAGAAAGGTGAAAATTAGTATATAATTGCTGTCGCATCTCCACTTGCTGGTGTCATTGTGAGCCTAGGATTTGTTTTTCTCAGGACTTGCTTATTTTGTTGATATGCAATTGTAGTAGTGTTGGTATAAAGTGTTCCTACTGGCAGTAGATAGAGGGAATGTCTCGTACCGAGTCTGTGGTTCGAATCCCCTCAGTGGAAGTTGATTTTTCTGTTACATTTGGAGCCATTGTAGGGACTGGGCGTTTTCTTAACACCAGAATACAATTATAACCCAGTCTGGACCCCTAACAGTTCAGTTGCCTGTGCCCCCACAGCTGAGGGACATAGCTTCACTTGAGGTGGGGAGTATGTAGTAGTGTTTGTTTAAGTGGCAGAAGTTAAAGGGAATTTTCCTATTAGCTTAGTCAGAAGAGCGCTGTGGTTCGAATCTCCTCAGTGGAGATTGATTTATCTTACACAATTTCTGTAACAGAGTCTACAGAGTATTTGAAAGTGGTGGGGGAATGTTGGTGTGATTTGAAAGTAGGGGCCACTGTCAGTCTCTTGACCTAGGGAAGGGAAATATAAGGGCCCATACCTGTTAGATGGGTTTGCGATGAGTGGGTGGGTTTTCATCCTTGACTGAGAACATTTAGAATCTTAGATTTTCAAATACAGAATTTGCTGCAGTCTAAGGCCAAAACGACAGGGGAAAAGTGTGTGTGTGGCCTCTTTATAGCACAATGTAACATAAACACTGAGCTTTGATATTTCTTAGTGGGGGAATTATAGTTTGCCAAAATGTTGTAGTATTTTGGGGTGTCTAAACAGCTTAGTGTGTGGGACAACCTACTTTTGTGAATGTTACCATGAAAACATTCATATTACTAATTTCAAGAAAAAAAATTCCTCAATTTTTGTTAAGGTTAGTTGTTGAGAAACCTGTATTCTGAACTGGGTGGGGGTGGGGGTAGAAATAAACCTACATGGAGGCAAATAGTTGTCCCTTGAATTATACTTTCTAACCCATCCCAAGCAATACCCCACGACTGGTATATCAGAGGATTTGATATGTGCTGTCCTGTCGTATGTGACTTATTAGGCCCATGGGCCTCTTGTTTCTCCCCCTCCCTGATCTCCACTGTATATCAAAAACTGGTATGTGGCTGTTCTGTATGTGAAACGTGCAAATAAAAGATCCCTTGCTGCTTTTGGAAAAATGTAACAGGTTTACTCTGAAGACTGTGTCACAGTTAACAAATAAAATTACACAATATTTTCTCGTTTTTTAATGAATTGGATGCATCTACTGTTTTGGAGTCTGTTGAAATATTGGCAAAAAAATGTTATATATTTTATTATTAATCATGTCGCATGCCAAAAGACAAATTGTTACT

Transcript

ctg1136-1.7-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16493	Meis_PKNOX_N	N-terminal of Homeobox Meis and PKNOX1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032453	Domain	Homeobox protein PKNOX/Meis, N-terminal	Interproscan
IPR050224	Family	Three Amino acid Loop Extension (TALE) homeobox	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1136-1.7-1 global RNA-seq network