Gene detail

Detailed information of ctg1029-2.15-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1029-2.15-1	SLIT HOMOLOG	chr6	34899859	34918993	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1029-2.15-1

TGCATTCTTTTTTAAAGAACTTCATTAATTTTATGCAACTTTTATTCTAAATCAGATGCTTTTTTTCATATTTGTATTTAAGTTTAATCGGGCTACTGGAATCTGAATGAAGTACTCTGGAGGCTATGGCATCTTGGCTGATTGCATTGTTTACATTTGGAACATTTGTGTTTGGACAAACACCAAAACCTATTATAGACCGGTGTCCTGACTTTGTGGATCCATTCTACTTGACGTTCTGTGGCACGCCCGACAACCCTGACAAGTGTATTCTAGCCAGCTGGGTGTGTGACGGGGAACCGGACTGTCCTGATGGGAAGGACGAGACACCGGCCACGTGTAACAATGCTGACCCATGTGACACACAGCCATGCCTGAACAATGGGACGTGTTACGGCATACCGGCCAAAGCCAATGTTACTGTGGCTTACACGATCTGCATGTGTATGCCTGGTTTTACTGGCTTGAAGTGTGAGAACACCATACCAGAGTCTATCACTGTGTTGTCTACACTTCATCCTCTCATCACCACACCATCTCTTGTGGTTGACCCGTCCGTCTGTGAACCGAGCCCGTGTATGTATGGTGTGTGTACTCCTCTGAGAGCAGGACAATTCTACTGCAACTGTGTTCCAGGTTACGGTGGCAAACGATGCGAAGCCCCGTTGAATCCCTGCATCTCTTTACCTTGTTTAAATAGTGGAATGTGTCAGGTGTACCAAGAATCCTTCATCTGCCATTGTTCAGCTGGCTACAGTGGAAGACAGTGCCAACTAAACATCGATGAATGCGCCAACAGTCCATGTCTTAACAATGGTACATGTGTTGACAGTGTCAACAGATTTATCTGCCAGTGCCAAGAAGGATTTACAGGAAAGCAGTGTGAAACCAACGTGGATGACTGTAGCCCCAATCGCTGTTTGTCTGGCGGTACTTGTCAAGATGGTGTCAACTCATACACCTGTCACTGCCCAGAGGGTCGAGCTGGGCGCCTGTGTGAGCGAGAACAATTCTGTAGACAGGTAGATCCGTGTCTGAACCACGGAGTGTGTTTTCCATCCACTACTCAAAGTGCTGCGCCACACTGCAGTTGTCTCCCTGGATTTACAGGACCACTGTGTGAGGTTAATGTGGATGACTGTCAAGGAAACCCATGTGTTCATGGTACGTGTTCTGATGGAGTGAACCGTTTCCAGTGTACCTGTGACCGGGGATACCAGGGAACGAGGTGTGAGGAAGAGCACGACCTGTGTGTTAAAAACCCGTGTCAAAACAACGCCTACTGCTGCAGCCATGCCAGACAGTGGTGTTCACGCAACCTCCTGCCAGGCTACTACGAGTGTTACTGTTCCGACGGATTCACAGGGACAAATTGTGAGCGGGAAATAAACCCATGTGCAAATGGTCCATGCAAAAATAATGCAATGTGCACAGTGATTAATGGCAACTATCAGTGTACTTGCCCACTAGTGTACAGTGGAAAGACCTGTGAGGTTCCGCAGCCGTGCAACAGTAATCCGTGTTTCAACAGCGGTCTTTGCCAGCCATCTGGAACGTCCTACTCCTGCAACTGTACAAAAGGTCATACTGGAGAGTTCTGTCAGATAACCCAGGCGTGCACGACAGACTCCTGTCTCAACAATGGCACATGTCAGTCGGAGAAATCCGAATCGTTCTGCATATGTTCATCAGGTTTTACTGGGTCTTCTTGCGAAACAAAACTCTCCTGTGCCACCCAGGTCTGTCAGAATGGTGGAACCTGTGAAGACGTGTCTTCCACTGAATTCCGATGTCTTTGCCCACCACAGTTCACTGGCCAGCTTTGTGAGAGATTCATTCCATGCGCCAGTATGCCATGCAGAAATGGAGGGACATGCGCGAATCAAGGTCAAAACTACAGATGTACCTGTGCTGCAAATTTTACAGGTGCTTCGTGCGAAACTACAATCTACTGTAACAGCTCACCTTGCTTGAATTTCGGGAAATGTTTAGAAAGTGAAAACGGCTTCAAGTGTAGTTGTCTTCCACAGTGGACTGGGGCACGTTGTGAGACCTATCTTCCGTGCATTAACCATCCATGTAAGTTTGGTGCAGCCTGCATAAACATTGACAGTAACAACTACCGGTGTATCTGTCCATCCTCCAGGACTGGTAAAAACTGTGAGACTTACTTAGCATGCTCCAGCAGTCCTTGTCTCAATGCAGCTCCGTGCGAAAATACGGGCAACACCTACAGATGTATATGTCAACCAAGGTACACTGGAAAGAATTGTGAGAGTTACGTCCCTTGTTCCGAATCCCCTTGCATGAACGGAGGAACTTGCACCGATCTACAAACGTCATACAGCTGTGCATGCACAGATGTGTTTTCGGGCCCTAGGTGTGAGATCTATTACCCATGTGGCAGCAGTCCCTGTAGAAATGAAGCCGTCTGTGTGAACACTCCACAATCATATTCGTGTCGGTGTCGGTCCCATTTCACAGGCCGGAACTGTGAGACGAAAATCAGTGCATGTTTACCAAATCCTTGCCTCAACAAAGGAAACTGCTCTGAGTTCGGTTTGACATACACGTGCTCCTGCCCAGCAACCCACACGGGGCCGACATGTGAGAGATACATACCTTGTAGTAGCCAGCCGTGCATGAATGCTGGCAGATGTGTCAACATCGACAGCTCTTATCGGTGTGAATGTCCAGAAAACTTCAGTGGTGTTAATTGTGAAATTCAGCTTCCATGCGCTAGCCGGCCGTGTGTTCATGGGATGTGTGAGAATAACAATAACAGTTATGTCTGTCACTGTGCAGCGTCGTACACTGGCAAAAACTGTGATTCTCAGATCCGGACATGTGACTCGAATAACTGTATCCACGGAAGATGTCAGTTGAACAATAGTGTGCTCACATGTGTATGTGATGAAGGGTTTACTGGGCCTGATTGTGCAACTGAAGAGTTATGTCGACGGATAACCTGTCAAAATGGAGGAACGTGCATTAACCGTGGCACGTCATTTGTCTGTCAGTGTCCACCAGGCTATGGTGGTGTCATTTGTGAAACTCAGCAGTCACCGTGTGCATCCAATCCTTGTCAAAACAACGCCACCTGTCTCAGCAACAAGGAAAACAACATGTTTCACTGTTTCTGTCAGCCAGGATTTACTGGCACTCTTTGTGATAAGGTTCTTAATCCGTGTGATCTTCTCCCGTGTAAGAATAATGCCACGTGTCTCAATGTTGGAAACTCCTATGTGTGTCAGTGTCTTCCCACCTACACAGGTAACACATGCGAGAGACTGCTGGATCCCTGTTTGTCTAAGCCATGTCGTAACTATGGTGACTGCACCTCATCAGATGGACTGTCAGTTTCATGCACCTGTCGTCCACCATACACAGGTTCATTCTGTGAGACTGTGGTGACCAGCTGTAATCCGTCTCCGTGTGAAAACTCTGGTAACTGTTCTGTTGATGAGTTTGGAGTCTTCTGTGACTGCACTGCTGAGGATCAGGGCTTATTCTGTCAGCTTTCAGAGAATGGGTGTACAGAAGACTTCTGTTCAAACAGAGGAGAATGCTGGAACACTCAGTCAGGTCCAGTCTGTGAATGTCCTAATGGCTATGTGGGTCAGCGTTGTGAAACGAAAGTCATGGGCTGTAGTTCTAATCCGTGTAATGAAGGATTCTGCTTTGAAGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCAGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGCAGGTTGTGTGTTCCTGTATGCCTGGTGTCACCGGTAGAAGCTGTGATGTGCTAGTTACAAATGTGAGTGTATGTGATGTTTGTGTGTTTGAGGACAGTCAGGGGAAAGTTGTGTGTTCGTGTATGCCTGGTATCACAGGTGGAAGCTGTGATGTGCTTGTTACAAACGTGAGTGTATGTGATATTTGTGCATTTGCGTGTTTGAGAATCACAGTGTTGTCAGCATCATCATAA

Transcript

ctg1029-2.15-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR051355	Family	Notch and Slit guidance protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836	SLIT HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1029-2.15-1 global RNA-seq network