Gene detail

Detailed information of ctg1-6.13-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1-6.13-1	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	chr4	83296517	83312482	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1-6.13-1

ATGGAAGACCAAGACAGTTTGGTGGTGCAGTGGCATGAGTTGTTCAAGGAAGCTATTGATTTTGATACCTGGGGACAACCACTAGAAGCAGCCGAACATTATAACAAGTATCTCTTTACATTTTTATATTGTATAGCTTTTGTTGTGAAGTTACTTGAAACAGCCGAGTCATTATTGTTTAAATGTGTTTTTATTGATTTTTCCCAGAAACTACTTGACAAGATCACAGTCTGTCTAGATGCTCGCTGCAAGTCACTGCAGTTCGAGCGTGTTACGCTGCAAGAAGTTAGCCGGCGGCGACCCAGGTTGTCGTGTTCGTGTGGCCTCACTTCTAGATGCGACCTTTGTGCGGGCTTGTCTGATGTCGAGTTCGCGGCTTACCTGAAGGTGGTGTCAGCGAAGACCAAGAAGGTGGAATCTTCGAGGACCAAGAAGGTGGAATCTTCGCCTTCGATTGCTGACTCCATGGCGGAAGACTTACGTTCAATTCTACCGACCATGCTGGAAGAAACAATGGCGTCAATGGCGACCTTACCTAAATCGGCGAGTTCGGGGTCAGTCTACGGCGGCCATTTTGAAAGCGCACAGATCATCTACTACTGTGGCTTACAACGTCAGATGGCTTTGCTTTCACCGAGGGTGTGTCCGGCAAAACCTCAAACCTCAGACGATCCAGATACTTCGTCTTGCTGGGTTTTTTGGCTGTATCTGCGGACCACTTTACGATTAAAGGGGTCTACCATCGCTGGGTACGTTTCGGTCATCGCTACTGTTCGTGATGTCGCTACTGGAACGAAGTTATCGGGTATTCCTGAGATCCATAAGATGATCAAAGGGTTTCGCCTTGATGATCAAGTACACCGGTTTCGGCCACCAAGATGGGACCTGAATCTGGTGTTACGAGTGTTATCGACCGCACCTTATGAGCCGATCGAATCCTCTTCCCTGCAAGACTTGATGCGGAAGACGGTGTTTTTACTCGGTTTTGCCACGGCTGCCCGTGTCTCAGAACTCCATGCTCTTGATGTAGACTTGGTACGTTTTCACCAAGATCGGCGTGCAGTCAACTTGGGGTTACTCATGAACTTTGTTGCAAAGAATCAGTTACCAGACCAAGCGCCTCGTTCGTATGTTGTGCAGGCCCTCTCCTCTATCGTTGGTCCGGCGGACGTTGAGGACTTGGCGTTGTGCCCTGTCAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATCGCAAAAGACTTTTCCTTTCCTGTAACCAGAGTCGGTTGAGGGACCTTACCAAGAACACGGTGGCCACCTGGATCCGGTCTTCTATCCTGACCGCCTATCAGAAGGAGGATTTACCTGCTCCGTCTGCTTCTAATCCGCATGAACTCCGTGCCTTGGCTGCCACGATGTCCCTGCACTGCAACACACCCATTCAGCACATTATCACTGCTTTGAAGAACTTAGCAGTGATGACTGGAGGTGATTTTCCTGTTGATGTGACAGTAGCTCAGATTCAAACACACAAGTATCCTAGGATCAGTCTTTTGCAGAATGGCTCTTCTGATGAAGATACATCTTTTCAGAAAGCACTTGGTACTATACTGCCGAAACCAATGCCAATAGCCGGTAAAACATTGTTGACGATACGGGTGGAGAGGATTGCCCTGAAAGATACATCTCAGTTTATAGATCCCTTCATTACAGTGTCTGTTAAAGATGCAAATGGGTATGACATGGCAGCACGACAAGATACACCCACTGCTAGTGAGAAAACAGATTCTTGTGTTTTCTTCAATGTTGATGTTCACATACAGAAAACGGTAGAAAGCCTTCCCCCAGGTACAAGAAACCAACTGATTGTCAACATTGAAAAATTGTTATCATGTCTGATGTTAATGTTCAGCGACTTGTACGAGCGTGTTTACGCTGTAAGAAGTTCACTGCAGGCGGCGACCCTCATGATTTATGTCCGGGTTGTCGTGTTCTGTGTGCCCTTACTTCAAGATGCAACCTTGTTCGGGGTTATTAGATGTCGAGTTCGCGGCTTACCTGAAGGTGGTGTCAGCGAGGGCCAACAAGGTGGAATCTTCGCCTTCCATAGCAGACTCCGTGGCGGAAGTATTACGCTCCATTTTGCCGTCCATGCTTCAAGAAACAATGGCGTCGATGGCGACCATACCCAAACCGGCGGTTTTGGGGTCAAGGTCCGGTTCCAGTCCCCTCTTCAGGGGGTGCGGCTTCTTCAGCTCCACCGATACCTAAGACTTCGGATGACAGGCCTGCGGTCTCTACGCAGCCCTCTAAGAAGCCGACTCATTCAGATAGACACTCCACAGATTCCAAGGCTCACTGATCTTCGGCAGGGAAGTCCTCTTCGGCGCATCGGAGCCGGGACCGTGGCCGCTCCCCACGACCTGTACGGCTCCCTACGGGTTCCACGGATCGTCAGCGCCGACCTTCAGTTGATGTGGCTTCCAAGGCCTCCGAGGGATCTAGACAGGACCGTCCACGGTTTAAAGATTGAGTCATCGGGTCACAGTTCGGTACCGTCGTCCCGTGATCAATCGATGTGGTACAGCATCCAGGGTTCCACCGGCTCCTGCCGGTCCGTGTACATCGTACTGTCCACACCAGTCGGCAGCTGA

Transcript

ctg1-6.13-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08910	Aida_N	Aida N-terminus	Family	Interproscan
PF14186	Aida_C2	Axin interactor dorsalisation-associated protein, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR023421	Domain	Axin interactor, dorsalization-associated protein, N-terminal	Interproscan
IPR025939	Domain	Axin interactor dorsalization-associated protein, C-terminal	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036818	Homologous_superfamily	Axin interactor, dorsalization-associated protein, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35617	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1-6.13-1 global RNA-seq network