Detailed information of alvinactis_v1_g9780 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_4:29598554...29600299
NR annotation: XP_031566625.1, uncharacterized protein LOC116301674 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P12107Collagen alpha-1(XI) chain OS=Homo sapiens OX=9606 GN=COL11A1 PE=1 SV=4
Q61245Collagen alpha-1(XI) chain OS=Mus musculus OX=10090 GN=Col11a1 PE=1 SV=2
P20909Collagen alpha-1(XI) chain OS=Rattus norvegicus OX=10116 GN=Col11a1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF00024PAN_1PAN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003609DomainPAN/Apple domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16146INTELECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0070492Molecular Functionoligosaccharide bindingInterproscan
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

TOP