Gene detail

Detailed information of alvinactis_v1_g8860 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g8860	SERINE-THREONINE PROTEIN KINASE	chr_4	16452506	16464590	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g8860

ATGAGTCTTGGTAATAATTCAAACACCGGCATCCTTCACGGCCTCTGCAGCAGAGGAGCAGTCAACGAGATTAGCCGATTCTTGAGGGAGTCGCTAAGTTTTGCAAACCAGTTGGAGGAACGAGTTGGTTTCCTTGGTTACACACCCCTGCATGAGGCTACGCACAGGGGTCATGTTGCCATTGTGCGATTATTGCTTCTTTATGGTGCCAACCCTAATGCGACTGCAAATGGATCCTACACATGTCTGCACATGGCAGCATCAATGGATAACCAGGAGTGTGTGATGGAACTGATTAAGTATAAAGCCGATATAGGATGTCGTGATGAATTTGGGAAGACACCATATGAGACGGCTGTGATTCATAAGTGTAAGAACACTGCTAAGATACTGAAAAGTGCTGAAATTCTAAAACTTGCCCAAGAGAACAGTGCTCTCCTGAAAGAAACACTGCGATCCATTAAGACTGATAACATTTCACCATCCTGTCTGCAAGAAGCTCTGGAGAGAGCCTCTCAAAAGGGGCACGTGAATGCAGTTCAGTCCATCATTTTGGCTGGAGTAAAGGGATCATTGAAGTTTAATGATTGCATGGTTATGGCTTTGCAGTTTAACTTCATTCAGGCATTATCTGTGTTACTTGTCTGCTATGCAGCGCAGTTGGGGCATGTTGAGATGTTGCAATATTTGTTGGATGGACATCAGACACAGGAACAGAAAGATATCGCTTTGAAGCAGCTTCCTTTCTCCAAAAACTGTCATAGTCACATCATCAACATAAGGAAATATATAAAGGACAAAGACACATTCCATGTTGCTGTTCCTCTACAACTTTCTCTTCACAATAAACACAAAGAAGCAACTAAAATCCTTCTAATGAGCACCAACTGCAGCAAGGATAGCAGAGTGATAGAATGGAGAAAGCTTGCTCTGCGTGAGCTGGATCCTTCACTACTCAAAGACATTCGATGGGTTGAGAGACTTCAACTTCCCTACAATATGCTGGTCACCATTCCAAGTAACATTGTTGACCTTCACAAGCTCTGTCGACTAAATCTCCAAAACAATCAACTCCAAAGAATTCCAAGTGGCTTGGTTAAGATGAATTGCTTACGTGTCCTGAACTTGTCCCACAACAAGTTGACAGAGCTTCCAAGAAAAAGTCACTGGTCACCTTCGTTGAAGACCCTTGATGTCAGTGATAACCTCTTAGAAACTTTACCAAAGAACATGGCCACTTCCAAGTTGAAGAATTTGTATATCGCCAGGAACAGCTTGTACGAAGTTCCACCTTGTGTTTGTGAGCTTCTGACGTTGATGACTTTGGATTTGTCTGGCAACAGTAGACTGACTCAACTCCCTGTGCAAATGGGAAAATTGACGAACATATCAACACTGAAGTTAGATAATCTTGATCAGGTCACTGACCCACCTGACCACATCAAAAAAAATGGACCCAAGACAATAATGTATCTACGAGCAAAATTACGTAACGCAAGAGGTTACTACTCCATGAAGCTCATGCTTGTGGGTCGAGCTGCACAGGGCAAAACTACACTAATGCATCGACTCATGCTGGACTACACATACAACTCTAACAGTGCAACCAATGGAATATCCATGGACGAATTCAGAATAAGAAAAGACCTTTTCCACAAGGAATACCTTTTCAGATTATGGGACTTTGGTGGTCAAGAGGATTACTACGCCACTCACCAGTGCTTTCTGTCCACTCTCTCACTGTATATATTAGTATGGAACTTAGAGGAAAGGGAAGAGGGTGTGGCTAAGCTGGAGGGTTGGCTAGACACCATTTCATCCCGTGCCCCTGGAACTTGTTTGATCATAGTAGGGACCCACTTGGACAAGATTAGGAAAGATAAAATACACTACGATGACGAATATGTGGCTGGTATGCATAAACTCGTTGAAGACCTGAAGGCACAGCCCAAGTATCAGCGTATTGTTGTCCTGGGTATTAAAGAAGTCAGCTGTGCTGTAGATTCCAGAGAAGGCATTGATGAATTACGGATCTCTATTTACGATGCTGCTTTTTCAATGCTTAAAGTCAATGGTACTGATGAGGTTTCTGTCATGGGAGAACTGATTCCTCATAGTTATCTTCTGATCGAAGAGCTCGTGAAGAACAAAAAGGAAGAATTCAAGAAGACAAACAGGCTCCCCTTCATACATCGAGCAGAATTCGAGGCTATTGTTACAGATACCATAAGACGAGATTCGTCCGATGTGGAGGATCCCAATGATATTAAAGATGTTACCACATTTTTACATGAAAGAGGTATTTTGATGCACTACGACGACCCAAATCAAGATTTACAAGACTACTACTTCATCGATCCTGCGTGGCTGTGTGACCTTATGGCACGCATTGTTACCTTAAAAGAGGCCAATCCTCACATAATCAACGGCATACTCTTCCGAGACAAATTTGAGTTCATCTTCAGAAGTGAACGTTTTCCCTACGAGTACTACCCCCAGTTTGTGCGCTTGCTCAACCGTTTTCAAATTGCCTGCTCTCTGGACGAGAATCGTCTTCTTGTGCCTTCGAAGCTACCAGAAGAAAAACCAGCCGAAGCAACCAACGTGTCTTTGCCATTCATCACAATCAAGCGTATTCACTCCCTGCCGTTCATGCCGTACGGTTTGTGGGATAGGTTGATGGCTAGGCTGTTGTACTACACGGAAGATATGTTGACGGCCGGATGTTCCAGTGAGCCAAGGCCCTCTAGTCCAGGAGGCCCAGAGATCCATCACCTGAGTCCATTTCTTCTTGACCCCTTTTCTTGCAAGTGTCCTCTTGTCTCCAGTGGTGTTGGTGTTGGCTTGTCCGACTCGGATGAGCCTCGTGAAGCCTCTGCTGGTTTTAACGAGAACGATCTGAAGCAAGGAGCAAATCAGTCAAATGAAGAGTCCACGCCCAGTGAAGAGATTGACGGCCCATCTGGTGACAACGAAGATGTAGAGCTCgacgatgatggagatgatgaatttgcttttgctggtgtaacgcgatacgttgatggtgaagatgatgatTTACAAGGTGGAGTTCGCATCAATGGGCAGTGGTTTCGCAACGAAAGGTCTTTAAGTGATTCAGATTTTGGTTACAGTACTGATGAAGATGGGGAGTCCATTGGGTATGGTGTGCGACAAGGGCCTTATGTCCCTCGTGTAGTTCGACATCGAGCAATGAGTTACAAAGGAAGGAAGAAGAAACACAAAGAACAAGTCAGCGAGTCCTTCGATTTCTCACCCCAAAGCTTTAGCCATGCATCTGAACAACTTCATACTCGCACTAGCTCGGATGCAGTAAGCTCTGTAAGCTCATGCTCGTCGTCCTTCAACCGAGAGCCGATTGAACCACGTCTCAGTAAAAAGAAGGCTGATTCAAGTCAAAAGGCACCAACTGGGTCATATAATGGCAGCGGTTCAAGCTTGGCAAGCTCATACACTTATCGTAAAAGTCAGTCCAACCCTACCATCAGGGAAAATTCGTTATTTGGGGCGAATGTTCCTGTTGGATCACCTGACAGCCTTAGTAGTCACTCGCCAAGATCTGACCACGACAGAAGCACTTCCAGCTCCAGCATAGAAGCTCATCAACTTCCAAAGCCGATTCGGATCATCCGTCAGGAACCTCTGGACCCGCCAGTTGATTTGGAACAGATTCAAAGGCAAGCGTGTGAACTGCCTTCGCAAAGCAGTATATTCAAGAAAACATTGGAATCTGATGTGGATTCAGCATTCTTGACTGATCAGCTAAGTATGAATGGCAGCTCAGGGGAAGGGAATTCCAAAGAATCCAGTGTGTCATCTCGGTTGCTTCCAACCATAGAACAATACTTGCACATTAACAATCATGAAGACTCCAGCAATGATATTTCTCAACACAAGGAAAACAAGTATAAAGCTGTTAAAGACACATCGATGCCTCATCACAACAAAGGAATTGTTCAAAGTCTTGCTGAACATTCCCACACTTTAGGTTCCACTTGGCCAAACCAAATGCAAACAAATGATATTGTATCCAGATCTCAAGGATCACCAGGGGCCTTCTATAGGATAGATCAGTCTGGAAGTAACAACACGACTGATGTTACAGTTTCGCGTAATGATTCCGAAGAGAAAGGAGTCTCGGAAGAACATTTGAAAGACGACACACCTCAGCTAGTGCCAAATGGCACGTCAAGCCCAAACCAAGAATCCTCAGAAGACAATTTGAGGAAAAACGTTCCCGATATTGAACAGAATGGAACGTCAGATCCAAACCAAGAAGGATCCTCTGAAAGCAATGCGACGACAAACGGCCCTGATCCTTTACAGAATGGCACGTCGAGTTCGAATCGTCATTCTGGAGTAAAACGCATTATTCAAGAACCAGTCCACGAACGTAGCTGCCTCGCACGTAAAGATTTCCCATTGAATGAGATCCCGGATATCGCCACTGACCTCAGCACTTTGGTCGATAGTGGATCCTTGCGTTGTTGGCGCAGAGGTGTGTGTCTTCAACACGAACGACTCTTTTCACTATATCAACCATGGACGACCCCACTGAAGAAGACCGAGTGCTCATCACATAACATCAAGCCACATCAATTTTCCTTTGTGGAATGCCAGTTGCAAAGCTCCAAAGCAGACACCATCCCGTGTCCGAACCACAGTGGGCTTGATCTTAATCTTCACCTCGTGGCTCCAGATGTGATGCTTCAAGATGTCGATCCAGATCTTTTGCTGTCTAAGGAAGAGATCATCTTTGACAAAAGTGAGTCGAGTCTTATAGGGTCTGGTGGATTTGGAACGGTGGTTCGAGGAAAGTGTCGAAACCAGCAAGTTGCAATTAAATTATTTGTTCAAAATGATGAAACGGATCCGTTAAAGCATTACTTCGAGGCAAGGAAGGAGCTAAACGTCCTGCGCCGTGTCAGACAGCACCCATACCTAATCAGTATTATCGGCGTTTGCCTTCGACCTCTATGCTTGGTACTTGAGCTTGCAGAGAAAGGCAATCTTCAAGAATCTTTGTTCAGCTCCATGGCTATACACAGAATCGTTTTATGCCGCATTGCTTATCAAGTCGCTGATGCACTGTCGTATTTGCACTCGTTGAATATCATTTACCGAGATCTAAAGCCGGAAAATATCCTCGTCTGGTCGCTAGATGAGCGAGATGATCTTCATGTGAAGTTAATCGACTTTGGGACAGCTAATTTTGCCACTTCGACTGGTTTGATTTCCTACAAGGGTTCTCTTGGTATCAGAGCACCGGAAATGCTGGAATTATCCGAGAGAAAGGAAGAGTACACCATGCAGGTCGATGTCTACTCGTACGCTATTCTGTTGTTCCAGATAATAGTTCGTAAGCAGCCATTTCAAGAATTCGATTCTGAACCTATGGTCAACGCAGCTGTTGTGAGAGGCGAGAGGCCGCAATGGAGTAGATGTGCTTTGTCGCGCTACGGGCTTCCCAGTCTCACAGAGCTCATGACACAATGTTGGCTAAGCAAGCCAACCCAAAGACCCAAGTCTGCGCAGATTGCTCAGCAAGTACGCATGCCTGCCTTTCAAGCGCTTCTTGGCAAACAACCCATACCTTCCCAGCAGTCTGTTCGTCACGCCTGTGTGGTCCCGGACGTCAAAGAGTTATGGATTGCTTGTGATGATCATTCGTCCAACAAGATTTTAATCTTTGATTGCAATAACCTTGATTTGAAACACACCTTTGTTATAGAGAGCTTCCAAGAACAAAAGTACGCTCTCCAGATCCAAGCTTTGCACCACGTGGCCGATCTCATGCTGATAGCTGTCAGAGGACCTGTCAATTTCATCACTGCTTATTCAACCACACCACGTTACAGCAAAGTGTGGTGCATTCCACTGAATGAACAGGCCACTTGCGTTACTTCTGACGAGTCGTACATCTACGTGGGGATGAACGAGGGGTACGTGCGTTGCATTCTAAAGAAAGATTTCAAGAAATCAGAGAAGAAGAGAAACGACCACATGATCAAAGTGGAACGACACTGTATTCTTTCCATTGTCGCAACAAACGAGAAGCTTTGGGTGTCGTCCAGTAAATACATATTCACTTACTTTACCAAGACAGCCGACATGGAGGCATTCGATATGGAATCCATGTGGTACGGAGGCTCCCTCGGAATGGAAGACAAACCTCAAACACGAATCAACAACTTGACGGCATCGTTTGATCACCAGAAAGTATGGAGCACGTGTAGGTCGGTGTTGACAAAGTGGTGTGCAGAACTGAGGCAGCGAATCTTCGAAATTGACTGTGCTCTCATTATTGGTGCCATTGATCACACCACTATGCTTCTCGAAAGCGATGCGTGCATTTTATGTATAGTTTCAATCTTGGATACAATCTGGGTCGGCACCGCCGGTGGTCACATCCTCATCTTCAGCGCCGACGAACCGAGGCTTCTCACATGGTTTCACCCCTTCGGTGAAGTCCGCACCCTGTCTGTGTGTATTGGACCAGGTCCGTGTGGCACAGAACAATGCTTAGTGATTAGCACTGGCAAAAACCTTCGTCATGATGGTCTTGGCACTCGCAACCCTGTCGTATGCCCATTAACCGCTGAACGCGTTCGACATGTTCCTGACGAGCTGTCGTCGAGAATTCAAGTCCAAGAAACGCGCTCGAGGTCCCATAGACGAAGTTCTTCCGGCTCCAAGCAAAAGGCTGGACATATTTTGGAAAAGGAAGAAGTCGATGCCGCCACACAAGCACTCATGTTCAAGTGTTCTATGCTTGTATGGGAAGCGGTGCCTGCCAATGTGCTAGCAAGGATGGAGGCGAAAAGTGGACGCGTTCCAATAGTTGCACATTATCAAAGAGAGTCGTCTTGCGAGTTTACAAGCGAGTAA

Transcript

alvinactis_v1_g8860

Protein

alvinactis_v1_g8860

MSLGNNSNTGILHGLCSRGAVNEISRFLRESLSFANQLEERVGFLGYTPLHEATHRGHVAIVRLLLLYGANPNATANGSYTCLHMAASMDNQECVMELIKYKADIGCRDEFGKTPYETAVIHKCKNTAKILKSAEILKLAQENSALLKETLRSIKTDNISPSCLQEALERASQKGHVNAVQSIILAGVKGSLKFNDCMVMALQFNFIQALSVLLVCYAAQLGHVEMLQYLLDGHQTQEQKDIALKQLPFSKNCHSHIINIRKYIKDKDTFHVAVPLQLSLHNKHKEATKILLMSTNCSKDSRVIEWRKLALRELDPSLLKDIRWVERLQLPYNMLVTIPSNIVDLHKLCRLNLQNNQLQRIPSGLVKMNCLRVLNLSHNKLTELPRKSHWSPSLKTLDVSDNLLETLPKNMATSKLKNLYIARNSLYEVPPCVCELLTLMTLDLSGNSRLTQLPVQMGKLTNISTLKLDNLDQVTDPPDHIKKNGPKTIMYLRAKLRNARGYYSMKLMLVGRAAQGKTTLMHRLMLDYTYNSNSATNGISMDEFRIRKDLFHKEYLFRLWDFGGQEDYYATHQCFLSTLSLYILVWNLEEREEGVAKLEGWLDTISSRAPGTCLIIVGTHLDKIRKDKIHYDDEYVAGMHKLVEDLKAQPKYQRIVVLGIKEVSCAVDSREGIDELRISIYDAAFSMLKVNGTDEVSVMGELIPHSYLLIEELVKNKKEEFKKTNRLPFIHRAEFEAIVTDTIRRDSSDVEDPNDIKDVTTFLHERGILMHYDDPNQDLQDYYFIDPAWLCDLMARIVTLKEANPHIINGILFRDKFEFIFRSERFPYEYYPQFVRLLNRFQIACSLDENRLLVPSKLPEEKPAEATNVSLPFITIKRIHSLPFMPYGLWDRLMARLLYYTEDMLTAGCSSEPRPSSPGGPEIHHLSPFLLDPFSCKCPLVSSGVGVGLSDSDEPREASAGFNENDLKQGANQSNEESTPSEEIDGPSGDNEDVELDDDGDDEFAFAGVTRYVDGEDDDLQGGVRINGQWFRNERSLSDSDFGYSTDEDGESIGYGVRQGPYVPRVVRHRAMSYKGRKKKHKEQVSESFDFSPQSFSHASEQLHTRTSSDAVSSVSSCSSSFNREPIEPRLSKKKADSSQKAPTGSYNGSGSSLASSYTYRKSQSNPTIRENSLFGANVPVGSPDSLSSHSPRSDHDRSTSSSSIEAHQLPKPIRIIRQEPLDPPVDLEQIQRQACELPSQSSIFKKTLESDVDSAFLTDQLSMNGSSGEGNSKESSVSSRLLPTIEQYLHINNHEDSSNDISQHKENKYKAVKDTSMPHHNKGIVQSLAEHSHTLGSTWPNQMQTNDIVSRSQGSPGAFYRIDQSGSNNTTDVTVSRNDSEEKGVSEEHLKDDTPQLVPNGTSSPNQESSEDNLRKNVPDIEQNGTSDPNQEGSSESNATTNGPDPLQNGTSSSNRHSGVKRIIQEPVHERSCLARKDFPLNEIPDIATDLSTLVDSGSLRCWRRGVCLQHERLFSLYQPWTTPLKKTECSSHNIKPHQFSFVECQLQSSKADTIPCPNHSGLDLNLHLVAPDVMLQDVDPDLLLSKEEIIFDKSESSLIGSGGFGTVVRGKCRNQQVAIKLFVQNDETDPLKHYFEARKELNVLRRVRQHPYLISIIGVCLRPLCLVLELAEKGNLQESLFSSMAIHRIVLCRIAYQVADALSYLHSLNIIYRDLKPENILVWSLDERDDLHVKLIDFGTANFATSTGLISYKGSLGIRAPEMLELSERKEEYTMQVDVYSYAILLFQIIVRKQPFQEFDSEPMVNAAVVRGERPQWSRCALSRYGLPSLTELMTQCWLSKPTQRPKSAQIAQQVRMPAFQALLGKQPIPSQQSVRHACVVPDVKELWIACDDHSSNKILIFDCNNLDLKHTFVIESFQEQKYALQIQALHHVADLMLIAVRGPVNFITAYSTTPRYSKVWCIPLNEQATCVTSDESYIYVGMNEGYVRCILKKDFKKSEKKRNDHMIKVERHCILSIVATNEKLWVSSSKYIFTYFTKTADMEAFDMESMWYGGSLGMEDKPQTRINNLTASFDHQKVWSTCRSVLTKWCAELRQRIFEIDCALIIGAIDHTTMLLESDACILCIVSILDTIWVGTAGGHILIFSADEPRLLTWFHPFGEVRTLSVCIGPGPCGTEQCLVISTGKNLRHDGLGTRNPVVCPLTAERVRHVPDELSSRIQVQETRSRSHRRSSSGSKQKAGHILEKEEVDAATQALMFKCSMLVWEAVPANVLARMEAKSGRVPIVAHYQRESSCEFTSE*

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050167	Family	Serine/threonine-protein kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-