| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g7431 | OPTICIN | chr_3 | 29769139 | 29779932 | + |
| CDS | |||||
| alvinactis_v1_g7431 | |||||
| Transcript |
| alvinactis_v1_g7431 |
| Protein |
| alvinactis_v1_g7431 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12799 | LRR_4 | Leucine Rich repeats (2 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR025875 | Repeat | Leucine rich repeat 4 | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR052489 | Family | Leucine-rich repeat and WD repeat-containing protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24370 | OPTICIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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