Gene detail

Detailed information of alvinactis_v1_g7409 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g7409	NITRIC OXIDE SYNTHASE OXYGENASE	chr_3	29441662	29461345	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g7409

ATGGACGACAAGAAGGACGAAGTAACACTGACCAAAATCGTCAAGCACAAGGTCGGTGGGCTGGGTTTTCTGGTCAAAGAACGCCAAACAAAACCATGTGTTACAATTTCAAGCATCGTGAAGGGCAGCACTGCCGAGGCTAATGGCACGCTCTGCCAAGGCGACGTTCTACTGGAAGTCAATGGAAAATCGTTGAAAGAAATCGAGTTTGAAAAGGCTTTGAAAATCTTGAATGACATCGCCATTGGGTCGACTGTGACGTTAAAACTTCAAGCGAAATTCGGCAAAAATGCTCGGGATAATCAAGCGTTCGTCGGTACACCTTGCAAAAATGGCAAAACCTTGCCTTCTAAAAGTGATGGCAAAGAAAAAAGCCCAGACATCAAAGACCCTGTTAATGGCCAAGCTGTAGATACGAGTAGCAATGGATTTAAAGCTACAAATGGCCATTCAGAAAAAGTCATGGCTGAAGAGACTGATGTACGTGAAAAGAAAGAAACAGCTCCACGAGTGGCTTGTGTTCACAAATGTCCTCCAACGGTCATGAAACTGAAAAACTGGGAGACTGGAAAGGAGACAATAGATACATTGCACCAAAAAGCTTATGTTCCCACTCATTGTTCACCGTCACGTTGTAAAGGCTCTATCATGAGACCTACTGCAGCCGATTTACCTAACGCAAGGCCTTATGGGATACCACGTTCAAAAGAGGAAGTCGCACACCATGCTGAAGACTTTATAGaacagtattatacatcgatgaaattGGCTGATAGTCCAGCACATAAGAAGCGTCTGACCGATGTACTTCAGGAGATCGAAGAGACTGGTACCTATGACTTAACCGAGAAAGAACTCATGTATGGAGCAAGGATGGCGTGGAGGAATGCCCCAAGATGCATCGGGAGAATACAGTGGAACCGACTTCAGTTATTTGACGCTCGTGATGTGTTCACTAATCGAGGAATGTTTGACGCCATCATCAAACAtattatatacggaacaaacaagggaaatattagGTCTACTATTACAGTGTTTCCACAACGCAGGGAGCCCAAGAAAGACTTTCGTGTATGGAATACACAGATCATTACTTATGCTGGTTATCGACAATCAGATGGTTCGATCATCGGCGATCCAGCCAACGTAGAAATAACTGATATCTGTATATCTCTTGGTTGGAAGCCAAAAGGAGGCAGCTTTGATGTTCTACCAGTAGTTTTACAAGCTGGTGGAGAAGAACCAGAATTGTTTGAAATCCCACCTGAGCTGATCCTGGAAGTGACCGTCAAACATCCCAGATATCCCTGGTTTGAGGAAATGGGATTAAAATGGTACGCATTGCCTGCTGTTTCATGTCTTTGTCTCGATGTCGGTGGGATTGAATTCCCAGGATGTCCCTTCAATGGATGGTACATGGTGACGGAAATAGCAGCACGTGACTTGGGCGACCCTGCTCGTTATAACATGCTAGAGCCCATTGCCAAAAAGATGGGACTCGATACAAGGAGCCACATCTCACTCTGGAAAGACACCGCTTGTGTAGAACTCAATCTGGCTGTTCTTCAAAGCTTTCAGGATGCTGGCGTTACCATCACGGATCACCATTCAGCAGCAGAATCGTTCATGAAACATTTCGAGAACGAGACAAAGCTTCGTGGTGGTTGTCCTGGTGATTGGGTGTGGATTGTACCTCCCATTTCAGGTTCATCTACTCCTGTCTTCCATCAGGAAATGCTTAATTACAATCTCAAGCCAAGCTATGAATGTCAGGACGATCCATGGAAGCATTATCGCATTCGTCAGAAAAAAGAATCTGCTTCGCCGAGAAAGAAACTCTTGTTTAAAGAAGTCGCCAAAGCTGTAAAGTTCTCTGCTAATCTGATGGGTAAAGCGATGGCAAAAAGAACCAAAGCCATCATTCTCTACGCTACCGAGACTGGCAAGTCTGAGAACTACGCTAAGATGCTGAGTGAGATGTTTTTGCATGCTTTCGATCCCAAGGTAGTACCCATGGATGAATATCCTCACCCAGAATTGGAAAACGAACAACTTGTTTTGATTGTAACGAGTACTTTTGGAAATGGCGACCCACCAGAAAACGGAGAGTCTTTCGCTCGTTATTTGTACGAGTTGCGGCATCCAACTAATGAAAAAGTGGAAAGTCAGGAAATGGCTACTATAAGCAGTCTTCTTATGCAGAAGGAAAAAGAAAAAGGTCTGAAAATGAAAGACGACGAGCAGCCTTTAGGAAGCTTAAGGTATTCAGTCTTTGGTCTTGGGTCACGTGCTTATCCCAATTTCTGTGCTTTTGCCAAATCGGCCGACAAGATCATTCAAGAGCTCGGCGGAGAGCAGATCTTCAAGATGGGAGAAGGAGACGAGCTGTGTAGTCAGGAAGAATCTTTTAAGACTTGGGCAAGGAATGTTTTCAAGGCCGCGTGTGAAACGTTCTGCATTGGAGAAGATGTGAATACTGCTGATGCAGATGCGTCGTTGAACACTATATCCGGCGGATGGTCCCCTGAGAAGTACAGGTTCACTCATGATAGCGGGAAACTCATGGATGCGGGTTCCAACCTCTCTGTATCTCACAACAAGACTATTGTCTCAGTAAAGGTTATCTCCGTTAAGAACCTGCAGTCTACTGACTCGAGCCGCGCAACACTGCTGGTACGCCTAGACACAAGTAGCAACAGCGACTTTACATATAAACCTGGCGATCATCTTTCTATCTTTCCTTCTAATAACAAGAAGTTGGTTCAGTCGTTTTTGGATCATCTGAGTGAAGCACCTGATCCAGATCAACCAATCATAGTTGAAGCGAGTCATGAATTATCAGGTCCCTTTGGAACGACAAAGAAATGGGAGAAAGTTCACCGATTCCCAGTTCCCATCACTCTCAGAGAGGCATTCTCCCGTCATATCGACATTACTGGTACTCCATCGCCACAGATTCTCAACTATCTTTCTACACAGGCCAATGATCCAGAAGAGAAACGATTTCTAGAAGAATTAGGAAAAGGCGACAACAGCTATGAGAACTGGAGATATGACAAACAGTCCAACATTGTGGAAGTATTGGACGAATTCCCGTCATTAAAGGTCAATGCAGCTCTACTCCTGACTCAACTTCCTCTACTACAGCCTAGGTTTTATTCCATCTCTTCATCTCAAGCCTTACATCCTGGAGAAGTTCACGTGACCGTTGCCGTGGTGAAGTTTACAAAACGAGGTGGCCAGGGCCCAGTCCATCACGGTGTGTGCTCAACATGGCTCGAGAGCCTGGTACCCGATGACATAGTTCCCTGCTTTGTCAGACATGCGCCATCGTTCCACCTCCCTGACAATGACACAGCTCCTATCATCATGATTGGGCCAGGTACTGGTATCGCACCATTCAGAAGTTTCTGGCAGCAGCGACAACACGACATCGCTAACAAGTCGCCTCCTCTTGGTGACTGGGGCAACATGGTTTTGTACTTTGGATGTCGCAGCTCAATACAAGATGACATCTATCAAGATGAAACAGCACAAGCTGTCAAAGCCAACGCCTTGACAAGGGTTCGAACTGCGCTGTCACGTGAACCTGACCAACCTAAGTGCTATGTGCAGGATCTCCTCAGAGAAGATGCTTTCGACCTTGTAGAAACACTGCTCTCCCAGCATGGCCACGTCTATACGTGTGGCGATGTTTCCATGGCAGCAGATGTGTGCAGGACACTACAGACACTGCTCGAGTCGTATGCTGCAATGTCACAAGCAGAAGCTCAGGACTTTATAGACAAACTCAAGAGCTCTGGTCGATATCATGAGGACATATTTGGTGTAACGCTAAGAACTCGCGAAGTAACAGATCGAGTAAGACATGCTGCTAGAAAAGCATGGGCATATATCGCTACGGCCAAGTCTGTCAAGGGCAAAGAGAAAACTGCCAAGAAATATCCATTGGATCGTGGTCCTACCGTCACAGTCTTGATGCGAACTGACTCGGAGGTTCGGGAGGAAAACATCACCAACGAGATCAAAAGCCAGCGACGATCGTCTCTAGAATGA

Transcript

alvinactis_v1_g7409

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00175	NAD_binding_1	Oxidoreductase NAD-binding domain	Domain	Interproscan
PF00258	Flavodoxin_1	Flavodoxin	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00667	FAD_binding_1	FAD binding domain	Domain	Interproscan
PF02898	NO_synthase	Nitric oxide synthase, oxygenase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001094	Domain	Flavodoxin-like	Interproscan
IPR001433	Domain	Oxidoreductase FAD/NAD(P)-binding	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR001709	Domain	Flavoprotein pyridine nucleotide cytochrome reductase	Interproscan
IPR003097	Domain	Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding	Interproscan
IPR004030	Domain	Nitric oxide synthase, N-terminal	Interproscan
IPR008254	Domain	Flavodoxin/nitric oxide synthase	Interproscan
IPR012144	Family	Nitric-oxide synthase, eukaryote	Interproscan
IPR017927	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR017938	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR023173	Homologous_superfamily	NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily	Interproscan
IPR029039	Homologous_superfamily	Flavoprotein-like superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR036119	Homologous_superfamily	Nitric oxide synthase, N-terminal domain superfamily	Interproscan
IPR039261	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan
IPR044940	Homologous_superfamily	Nitric oxide synthase, domain 2 superfamily	Interproscan
IPR044943	Homologous_superfamily	Nitric oxide synthase, domain 1 superfamily	Interproscan
IPR044944	Homologous_superfamily	Nitric oxide synthase, domain 3 superfamily	Interproscan
IPR050607	Family	Nitric Oxide Synthase (NOS)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43410	NITRIC OXIDE SYNTHASE OXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004517	Molecular Function	nitric-oxide synthase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0006809	Biological Process	nitric oxide biosynthetic process	Interproscan
GO:0010181	Molecular Function	FMN binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0050661	Molecular Function	NADP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-