Gene detail

Detailed information of alvinactis_v1_g690 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g690	MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE	chr_1	11651360	11658026	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g690

aTGCAGGAAGGACTTCGACAACTTTTAATCTACGATGATCTTAGGCGCGAGATTACTGACCCTAAGATCCTAGCTGAAGTAATCAATGTTTTCACTCAAAGTGATCGAGAGAAAATAGCCGCAGAAACTAGAGAACGTGGTGCCTCATATGGGGTACTTGAGCTGCTCAACAGGCTTACAAAGAGAGGTCCAAAAGCTTTTCCACAGTTTTTAGATGGTCTTGAACAAATGGAGCACAAAGAGACGGCCAAAGATCTGAGGGAAAAAGCAAGAGCCCAGAACCTGTTACCTGCAAAGCCAATCAATCCAGCCCACGCCGATGGCATAATTACTAAAAAAGTGCATGAGCTTCCTGTTGCAAGAGGACCTAAAAGAACTGAAGCTGCATCCTTCGTTGTTTCTTCCATTCCATATTCCAATGAAGAATCAAATCTTGCAAACAATTATATCCCAGCTCCTCATTTCTTGTCTGATAGTGGCTCAGATAATACCAGTGAATTGGATGCTGATACTTTTTCTGCTTCAAATAACTTACATGTAGATAAAAGGAATATAGGTAGTAATCAGGGTCCAGAAACTCTTCTAAGAGACATGCCATTAAAGTTGAAATCCAGAATAGTGAGTGCCATGAATAATGATTGTGCACTGGGAAATAACTGGAAGGGATTGGCAGGTGAAGCTGGTTTCACAGTTGAAGATGAAGAAAAGCTAAGGTCTTCAAGTGATGGTCCCATGGAGGGTCTCTTTCAGTGGATGGTGCAAAAACAACTCCATGTCTCCCATCTCATAGACATGCTACGAAAGCAGGGGAGAGATGATGTCATTAGTATCATTGGTGAATATGGCTATGCAGAACAACCTGGAATGGAAAAAACTAATCTTCTAGAACAAGCAAATCTTCCTTCTGCTTCTCAAGAGTCAGAAAGTGATTTCAAAGAATCTGAAGAAAAAAAACATTTAGAACACAAGCTCTCTCAAGAAGCAAGTGAAAATAAAGACGAGCAAGAGGAATTAAGTACTTATCCACCAGGTGATATTCCAGAAGACAATGTTTTCTTACCAGAGAATATCAATGGCAAAGCTTTGTTTATCAGCATTGAAACATATAGAAACATGACATGTCTTTCCAAACTCAACTATCAAGTAAATCAGCTATCTGGTGTAATGGAATACCATGGATGGGAAGTTCGAAAAAGTGGAAAAGACTGCATGTCTACGAGGATGAAAAGTATCATTGACAATTATCTTGGAACTATTGAAAACAGTGATGTGTGTCTGGTTTACCTTGCTGGACATACCTTGCAGATCAATGGTGAAAACTATCTACTACCAACAGAAGCTGATATCAACTCATCTACAGCTGATATAATAGAATGCTCTTTGAATATCAACAACTTTGTGAAAGAGTTAACCAAACGTCAAGCCTTGATGATACTATTGTTTGTGGATGGTGCACACAGCTGTGAGGGTGAATCTAGTAATCCAGCAGCCCTTACTGGCCTTGCCCCCATGTTACCCCCATCTAACACAGTCATTGCTTTTCCCTGTAAACCAGGGTGTATAAGACCAGAGTCAGAAAGACTATCCTTCGCAGTTGCCGTCAAAAAGATACTTGAAGACCAAGAAAACCCCACACCAGTCACACTCTTTTCTGCATTGAAACAAGAGCATCCAAGCTCCATGGTGTTCTCGTTATCACCGAGGTCACTTGTACCACTTTACATTTATACATCGCACGAAGGCCACGATGGCGTCGCTATTCGTAAACCAGTAAGCGACACTGCACGACTTGCCTTTATATTCTCTGATGATACGGACAAGAAGTTGAAGGAGCACCTAAATAACGACACAGAGCATTTGCAAGCTTCCCTACGACAGCTTGGATGGGAAGTCGATGTACACCCTAAAAGTGAACACCCAGATATTAAAGAGACTATCCGTAATACACTCAGGCAGCTTGAAGGAGATGAACTGAAAATTGTGATGTTGTATTTCATTGGATTTGAAGCAAAGGACAGTCATTCATTAAACATGGGTCAGTCCTCTCAGAATATCAACATGAAGTGGATGGTGAATCTCATGTGTGAATACATCTGTGGGCCCAAAGTTCTCATTGTGGATGATTCACGTCCACACGTGCCACAATCTCTCAAGACCGTTACGCCTCTACCTTCGGAAGTGTTGTTGAGCTTACCCAAGGAGAAGAAATTCGAGAATAAATCGCCACAGAGAGACAGTTTCACACTACTTTTCGCTCAAAACTTGGGTGCTTTCCCAGGCAGAAGCCTACGAGATGTCATCACAACCACGGCTTTGAAATGGAAACATCAGGAAGTGGAATCGAATCTATTTTATGCATAG

Transcript

alvinactis_v1_g690

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF00656	Peptidase_C14	Caspase domain	Domain	Interproscan
PF16739	CARD_2	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011600	Domain	Peptidase C14, caspase domain	Interproscan
IPR029030	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR031964	Domain	Caspase recruitment domain	Interproscan
IPR052039	Family	Caspase-related proteases and regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22576	MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004197	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-