Gene detail

Detailed information of alvinactis_v1_g6713 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_3:20067131...20083100
NR annotation: XP_020915922.2, putative leucine-rich repeat-containing protein DDB_G0290503 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g6713

ATGGAAGACTATTGGAAAGACAACGACAACGACAATGACGATTCAATGATGCTAAGAGATGGCGCCTTGCAGAACAGAGTGAGTTTAGCAATCGAGAACTACGAAGAGATGTTGTTTAATAAAGATGGTGAAATTTCTGCTTTGAAGAAAACAGTCGAAGAAATGTCTCTTCAAATGGAGGACCCAAGTCGTTTCACAGAGCGTCATGGCGTTGTGCAAATCAACGCTCTGAAAGTTGACCTGGAAAAGCACAAAACTTTATTGAGAGAGACAGAGAACGGCGAGAAGGAAATGTTCAATGCCCTCAAGGAATCTAAAATGGTCATTCGAGAAAGAGATGGAGAAATCAAGAAATTAAAGGAGTTTATCAAAACCCAGGAAGACAGACATGCGTCCAACTTTGACGATCTAAAGCAAAAACTGGATGACAGAAAAGACGAGTGCAACAGAACAAGCCATATTAACGAATGCCTTCAGCGATCCATTAAGGAAAAAGACGAGAGAATGGCAGAGATAAGACTGTCTTTGTGGGAAACGCAAAACTTCTGCGAACGAGAATCAAAACGATTGAAACAAGCCAACGAAGACAATGTTGTGCAGAAGGAGAGAGAATTAAGCGAGTTCAAGAGAACGTTCCAGGCAGATAAAAAACGCTTCGAAGAAGAGTTCGAAAAGCTACGGCGGTCAACATTAGACACATTAGCATTCAAGGAAGAAGAACTTCAGCGACTGAAAAATGCTGCGACAAACTTTCAAGACGCGATTAACATCGATGAAGCTACGATTGGCGAGCTGAGAAAGAAGCTGGAGGAGAAAGAATACGAATTATTCAACATGCATCAGAGTAAAAATCAAGATATACAACACAAAAGTGACGAACTTGAGAAAACAAAATTAAATCTCGACAGGAAGGTATTTTCTTTAGAGAAAGAGTTAGAAAAGGCGAAAGATGAATCAGAGGATATAATACGCGAGAAGGAGAGTCGAATAGACGAGCTGTTGAATGTCGTTGATAAGGAACAATGCAAGTCTAGCAATGAGATGAAGCATAGAGATCGAGTTATCGATGATCTTCGTAGGGACGTGAAAAAGTTACAAAAGGAATTTCAGAATGCGAAAGAACAACTTGCAATTACTGCGGATAAAGCGTCGAGTTCGGCAGCCGCCATGAAGCACTTGAATGATACAGTGACATCAGCACAGGAGCAAAACACAAGCCTGAATACCATCATTGAAACCATTCGAAATGACAAAGATAAATCTCTACAAGAACGTAACGCAGAATTACAATCTCTTCGACAAAAGTTCAGCGAAGCAAAGGAAGAACTTAGCGTCAATAAGGACACTAAAATCCAGTTAGACAAACTCAGCAAGGAAACCGCTGAAAAGAATGTTCAAATCGCTGTACTTCAGAAACACGTCAGCGAACTTAGACACATGAACGAAAACATGAAAGGAAGTGTTTCTGCTCTCACGTCCAAACTTGATGCTCAGACCAAGTCACTGTCAAAAGCGACAAAGACTTCGGAAATTTTGGAGTCCGCGAAGAAGAACAACGAAGAGGAGATTACCACATTGAAACGAGAACTCGAACACATTTCTAGAAAGAACGAAAGCTCAGAAGAAGTTCTAAACAACTTAAAAGACATTGAGAAACGATTAAAGGATGAAAATTCAGATTTGACGGAGAAGCTGAAGGTTTTGGATACTTTGCTGACTCACAAAGAACATGAATTAAAGACTTGCAAAGAAACACTAAAATCCTCGGCGACAGTTCTTCAAAGCGAGGAGGAAAAGTGGAAAATTCTGGATCGAACCTACGAGGAAGTCATTGGAAAACAGAAGAGCAAATTAGGAAAACATGAGCAAGAAATCAGCTCGTTACTTATGTTATCCAACGAGAAAGAAAATCTGGTAGTTTCTCTGGAAACCATGCTCGAAGAAGCGAAGAATACGGAGAGAAACCTTGAAATACGCGTTGAGAAGCTTTCTCGTGCGCTAGAAGTTGAGAAAAGTGGGCATTCTACTTCTCGAGAAGAGGGTCAAGAGTTCTGGGAAAAGTACACGCTCCTCTTGGGTGAAACGAGGAACCGTGAACAAGTTCACAAGCAGAGAATGAAAGAGGTAAATGATTACTACCGTGATCTCTTGGAACAAAAGAACGAAGAAACGCAGACGTTCAAGCAATTTTTGACAGAAACTGAACAGGGTAAAGATGAAGAAGTGAGAAAGGTCAAGAAAATGTTTGATGACTTGGAATTGAGTACGAAATCTGAAATGAATTCGAAGGATTTGCTTATCGACAATTTGAAAGCATCTCTGTCTGAGGCATCGAAGGTACATGATCAGAAACTAGGCGACATGGAGAGGACATGTCAAGGAAAAACAGTCGAGAAGGATACGGAGCTGAGTGGAATGAAAAAGGCAGTTGGACATCTCAAACAAATTCTCGAGCAGAAAAAACACGAACTTTCATTGGAGAATGAAGCTCACGAGCTTATCTGCCAGAAATACAAAGAGGATTTAGAAATGCTAAATGAATCACAAGCTGAAAGTCTACGAAGGGCAGAGCGTGAGAAAGAAGAGCTGAAACATTCGATGAAGAAATCTGTCGACTCAAAGGAAGGGGATCTGCAGGAGATTATCCGTTCGTCCAACGACGCGTTGGCTAAGAAGGACGAGATCATTACAGGATTCAAGCAATTTGTGCAAGAAACTGCAGTCAAAAACCAAACTGTTTTATCTGAGAAAGATGAGGTTATAAGACGTATGAAGCAGTACGCTGAAACTCTCAGCAAAGAGTTAAAAACACATGAACAAACCTTGAACTCTAGAGAGGATGAGATCGGGAAGCTAAAGACGGACCATCAATTTGGATTCAGTGTTTTAGTCAAGAAGTGCTCCGACATGGAGGAAAAGTTGCACAGAAGTAATGAAACTAGAATTAAAGCTGAACAAAGTTCTAGAAATGTTCTAAAAGAGTTCCAGGTAAAGATGAAACAGAAAGATAAGTTTCTTGAAGTTGTTCAAATCGACTTGAAGAAAGAACGAAGGATTAAAGAAGAACTTGAAAAACAACTGGAGAACAGCAATGCTCGACTGAAGAAAGAAGAACTCTTGATTAAAGAAGCGGGAAAAATCATCAAAAATGTCACTGAGGAAAAGAATGATGTAATAACGAAACTGAATGAAAATAATGGAAAGTGTGATGAACTGCAAAGGATGCTGACGGAAAATGACTCATTCATCAAGTCACTGAAGCAAGCCAAAGTCACTTTGGGGGAAGAAAACGAGTCTCTCAACAAGAACAATTCGAAACTACAAGAGAAGGTCAAGAAGAAAGAGAAAAAAGTTGCAGTAATAGAAATCGAAAGGAAGAGACTGAAAAGCGTCGTCCTGGATTTACAGCAAAAGAACAACAAAGCAGGAAAGCTCAACATTGCGATTAAAGAACGATTAGATTGGATGAGCATAGCAAACCAAGACAACGAACAATCAATGAAACAACTAAAACTAACGAGCAAGAAGAACAACGAAGAGAAGAACGCCTTACTGAACAAACTCACAGTTCTTGAGTCACAGAAACGTCAACACGAAAAGCGGATGAAAGATTTAAAACACATACTAATGGAGAAGGAGACGCTTCTCGCGGATCTTAAACAAACTCTTCAAGACTTGAAGTCCCACAAGGATGCCCTGGAGAAGAACATTGCTACACTGCAATACCAGGTACAAGAACGAGCCCAAGACAATTTCACAATGCAGGCAAAAGTTAAGGAGCTTACAGCAATGGAGCAGACCTTAGTAGCTCAGAAAGCAGAGATAGAAAGAATCAAAGACGACGAAATCAATGGATTGAGGAAGGAGTTGGAAGGGTTGAGGTTATATCTAAGTCAAGGGGAACAAATCATCACTAATGTATCAAGGGAAAGAGATGGGTTGATGCAAGAACTTGAAACATCACTGCAAACGCACAAAGACGTCGCTCAAACTATGGAATCGTACAACAACTGTCTAAGGAATGATAAAAACACCCTCCAAGAAAAGCTCAAACGACTAGACAGCATGGTAGGGGAGAGATACAAAGAAATTGGGGATTTGAAAAACTCGTTGAATTCTGCCGAAATCTCGAACAAATTTCTGTCTGAAAAGGTCAACGAAATGAGTTCACTCAAACAGGACTTGGTAAAAGAGAAGGAACACAACGACGCTCTTAAAAACCAGTTGAGAGAAGGggagaagatgatggaaaaggacgcggacgaaggacgaaAAAGATCGAAGAAAAGCGAGGAAGTGTTTCTGCACCTTCGACATGACTACCAAAATCTCGAGTCTGTTTTGCGCGAGAAAGAAACCGAACTAACAAATTCCCACAAAACAAATAACAAAATTGTGCTTGAAAACGAAGAACTGAACGAGCTTGTGAACAACACTTGTCGTATGAACAAAGAAATGGAGCACGCTTTGATTGCTTACAAAGACGAAGCAGAAACCCTTGAGGCTGCCGTGACTCACCTTAAAACTGATAACGAGTTCCTGGAAGATTTTGCAAAGGAGACGGAAAAAACTAAATTCAAGCTTGAATCGACTGAAGAATCACTCAGAACAAAGTCGAACGAACTTGCAGAACTGAAAGAAAAACTTTCGATGGAAACAAAACACAATTCGACACTACAGAATGAAGTGAGAGACAACGATTCGACTCGTCAAGAGTTGAAGGACCGATATGAAATACGCATCAAGGCATCAGAGAGAGAGATCAAAGAACTAAGGGTTATGTTAGATGAAAGAAACAGAGAGATATCGCTAATTAAAATGGAGAGGAACAACTTTGAAATCAAGCAAAGAGAAACAGAGTTGAAGGTTTTGGAATTGACAAATACGCTGAGAGGCGAAACAAGTTATGAACAAAACATGGTGCAAAGGAATAAAGAACTTGAATTAGAGCTCAGGAAAGTCCAGCACGAGAAAAGACTTGGATTGTTAGCTTCAAGTGTTGAAAGTCAAACGTCGTTGAGGGGAATACCGTTGCACGATGTAGCGACGGAACGACGTCTGCAACAAAAGGTGGACAACATCGCCATTGATAAACTGcgtaccttgcatacaaagGTCACACAACTTGAAATTCAGTTGGAACAAGAGCGACACGACAGAGTCAAGGAGCATGCCGAGGTGGCGAGGTTGAGGGCAGAGCTGGCTGTCTACAAGTCAATACAATAA

Transcript

alvinactis_v1_g6713

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16469	CROCC; rootletin	-	Cilium and associated proteins	ko03037	deepkoala