| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g671 | CARBAMOYLTRANSFERASE FAMILY MEMBER | chr_1 | 11267456 | 11290562 | + |
| CDS | |||||
| alvinactis_v1_g671 | |||||
| Transcript |
| alvinactis_v1_g671 |
| Protein |
| alvinactis_v1_g671 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00117 | GATase | Glutamine amidotransferase class-I | Domain | Interproscan |
| PF00988 | CPSase_sm_chain | Carbamoyl-phosphate synthase small chain, CPSase domain | Domain | Interproscan |
| PF02142 | MGS | MGS-like domain | Domain | Interproscan |
| PF02786 | CPSase_L_D2 | Carbamoyl-phosphate synthase L chain, ATP binding domain | Domain | Interproscan |
| PF02787 | CPSase_L_D3 | Carbamoyl-phosphate synthetase large chain, oligomerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002474 | Domain | Carbamoyl-phosphate synthase small subunit, N-terminal domain | Interproscan |
| IPR005479 | Domain | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain | Interproscan |
| IPR005480 | Domain | Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | Interproscan |
| IPR005483 | Domain | Carbamoyl-phosphate synthase large subunit, CPSase domain | Interproscan |
| IPR006274 | Family | Carbamoyl-phosphate synthase, small subunit | Interproscan |
| IPR006275 | Family | Carbamoyl-phosphate synthase, large subunit | Interproscan |
| IPR011607 | Domain | Methylglyoxal synthase-like domain | Interproscan |
| IPR011761 | Domain | ATP-grasp fold | Interproscan |
| IPR013815 | Homologous_superfamily | ATP-grasp fold, subdomain 1 | Interproscan |
| IPR016185 | Homologous_superfamily | Pre-ATP-grasp domain superfamily | Interproscan |
| IPR017926 | Domain | Glutamine amidotransferase | Interproscan |
| IPR029062 | Homologous_superfamily | Class I glutamine amidotransferase-like | Interproscan |
| IPR035686 | Domain | Carbamoyl-phosphate synthase small subunit, GATase1 domain | Interproscan |
| IPR036480 | Homologous_superfamily | Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily | Interproscan |
| IPR036897 | Homologous_superfamily | Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily | Interproscan |
| IPR036914 | Homologous_superfamily | Methylglyoxal synthase-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11405 | CARBAMOYLTRANSFERASE FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004088 | Molecular Function | carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006207 | Biological Process | 'de novo' pyrimidine nucleobase biosynthetic process | Interproscan |
| GO:0006541 | Biological Process | glutamine metabolic process | Interproscan |
| GO:0006807 | Biological Process | obsolete nitrogen compound metabolic process | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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