Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
Genomic Location: chr_3:17237888...17253567
NR annotation: XP_020902878.1, lysine-specific demethylase 2A [Exaiptasia diaphana]
| CDS | |
| alvinactis_v1_g6494 | |
| Transcript |
| alvinactis_v1_g6494 |
| Protein |
| alvinactis_v1_g6494 |
| Uniprot term | Description |
|---|---|
| Q640I9 | Lysine-specific demethylase 2B OS=Xenopus laevis OX=8355 GN=kdm2b PE=2 SV=1 |
| Q9Y2K7 | Lysine-specific demethylase 2A OS=Homo sapiens OX=9606 GN=KDM2A PE=1 SV=3 |
| Q5U263 | Lysine-specific demethylase 2A OS=Xenopus tropicalis OX=8364 GN=kdm2a PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17811 | JHD | Jumonji helical domain | Domain | Interproscan |
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF12937 | F-box-like | F-box-like | Domain | Interproscan |
| PF02008 | zf-CXXC | CXXC zinc finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR041070 | Domain | Jumonji, helical domain | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR006553 | Repeat | Leucine-rich repeat, cysteine-containing subtype | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR002857 | Domain | Zinc finger, CXXC-type | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR001810 | Domain | F-box domain | Interproscan |
| IPR050690 | Family | JHDM1 Histone Demethylase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23123 | PHD/F-BOX CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003712 | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0006482 | Biological Process | protein demethylation | Interproscan |
| GO:0032452 | Molecular Function | histone demethylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10276 | FBXL10_11, KDM2; F-box and leucine-rich repeat protein 10/11 | EC:1.14.11.27 | Chromosome and associated proteins | ko03036 | deepkoala |