Detailed information of alvinactis_v1_g582 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:10182719...10184950
NR annotation: XP_020905925.1, U6 snRNA-associated Sm-like protein LSm5 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2HJH0U6 snRNA-associated Sm-like protein LSm5 OS=Bos taurus OX=9913 GN=LSM5 PE=3 SV=3
Q9Y4Y9U6 snRNA-associated Sm-like protein LSm5 OS=Homo sapiens OX=9606 GN=LSM5 PE=1 SV=3
P62322U6 snRNA-associated Sm-like protein LSm5 OS=Mus musculus OX=10090 GN=Lsm5 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR033871DomainSm-like protein LSm5Interproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR047575DomainSm domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20971U6 SNRNA-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:1990726Cellular ComponentLsm1-7-Pat1 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12624LSM5; U6 snRNA-associated Sm-like protein LSm5-Spliceosomeko03041deepkoala

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