Detailed information of alvinactis_v1_g5489 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_3:3292922...3338861
NR annotation: XP_020914633.1, clathrin heavy chain 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49951Clathrin heavy chain 1 OS=Bos taurus OX=9913 GN=CLTC PE=1 SV=1
Q00610Clathrin heavy chain 1 OS=Homo sapiens OX=9606 GN=CLTC PE=1 SV=5
Q68FD5Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09268Clathrin-linkClathrin, heavy-chain linkerRepeatInterproscan
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan
PF01394Clathrin_propelClathrin propeller repeatRepeatInterproscan
PF13838Clathrin_H_linkClathrin-H-linkRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR015348DomainClathrin, heavy chain, linker, core motifInterproscan
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR022365RepeatClathrin, heavy chain, propeller repeatInterproscan
IPR016025Homologous_superfamilyClathrin heavy chain, N-terminalInterproscan
IPR016341FamilyClathrin, heavy chainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10292CLATHRIN HEAVY CHAIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030130Cellular Componentclathrin coat of trans-Golgi network vesicleInterproscan
GO:0030132Cellular Componentclathrin coat of coated pitInterproscan
GO:0032051Molecular Functionclathrin light chain bindingInterproscan
GO:0071439Cellular Componentclathrin complexInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0045334Cellular Componentclathrin-coated endocytic vesicleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04646CLTC; clathrin heavy chain-Exosomeko04147deepkoala

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