| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g5193 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 | chr_2 | 37424995 | 37507634 | - |
| CDS | |||||
| alvinactis_v1_g5193 | |||||
| Transcript |
| alvinactis_v1_g5193 |
| Protein |
| alvinactis_v1_g5193 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF00397 | WW | WW domain | Domain | Interproscan |
| PF00412 | LIM | LIM domain | Domain | Interproscan |
| PF00435 | Spectrin | Spectrin repeat | Domain | Interproscan |
| PF00569 | ZZ | Zinc finger, ZZ type | Domain | Interproscan |
| PF01477 | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| PF06297 | PET | PET Domain | Domain | Interproscan |
| PF09068 | EF-hand_2 | EF hand | Domain | Interproscan |
| PF09069 | EF-hand_3 | EF-hand | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000433 | Domain | Zinc finger, ZZ-type | Interproscan |
| IPR001024 | Domain | PLAT/LH2 domain | Interproscan |
| IPR001202 | Domain | WW domain | Interproscan |
| IPR001589 | Conserved_site | Actinin-type actin-binding domain, conserved site | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR001781 | Domain | Zinc finger, LIM-type | Interproscan |
| IPR002017 | Repeat | Spectrin repeat | Interproscan |
| IPR010442 | Domain | PET domain | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR015153 | Domain | EF-hand domain, type 1 | Interproscan |
| IPR015154 | Domain | EF-hand domain, type 2 | Interproscan |
| IPR018159 | Repeat | Spectrin/alpha-actinin | Interproscan |
| IPR035436 | Family | Dystrophin/utrophin | Interproscan |
| IPR036020 | Homologous_superfamily | WW domain superfamily | Interproscan |
| IPR036392 | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR043145 | Homologous_superfamily | Zinc finger, ZZ-type superfamily | Interproscan |
| IPR050774 | Family | KCMF1 and Dystrophin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12268 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0099536 | Biological Process | synaptic signaling | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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