Detailed information of alvinactis_v1_g5012 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:34729225...34740236
NR annotation: XP_020895636.1, splicing factor, arginine/serine-rich 15 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UPN6SR-related and CTD-associated factor 8 OS=Homo sapiens OX=9606 GN=SCAF8 PE=1 SV=1
Q6DID3SR-related and CTD-associated factor 8 OS=Mus musculus OX=10090 GN=Scaf8 PE=1 SV=1
Q63623SR-related and CTD-associated factor 8 OS=Rattus norvegicus OX=10116 GN=Scaf8 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR006569DomainCID domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR051485FamilySR-related and CTD-associated factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23140RNA PROCESSING PROTEIN LD23810PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13167SCAF4, SFRS15; SR-related and CTD-associated factor 4-Spliceosomeko03041deepkoala

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