Detailed information of alvinactis_v1_g4940 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g4940PROTEIN LIN-28chr_23364692633649336-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyCSD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR011129DomainCold shock domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR051373FamilyLin-28 homolog RNA-binding proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46109PROTEIN LIN-28Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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