Detailed information of alvinactis_v1_g4666 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:28900712...28924236
NR annotation: XP_028517767.1, uncharacterized protein LOC110248364 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P12111Collagen alpha-3(VI) chain OS=Homo sapiens OX=9606 GN=COL6A3 PE=1 SV=5
A6NMZ7Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q8C6K9Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR003582DomainShKT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06238COL6A; collagen type VI alpha-Glycosaminoglycan binding proteinsko00536deepkoala

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