Detailed information of alvinactis_v1_g4449 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g4449DNA EXCISION REPAIR PROTEIN ERCC-8chr_22540474825405947+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR042238FamilyDNA excision repair protein Rad28/ERCC8/Ckn1/ATCSA-1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46202DNA EXCISION REPAIR PROTEIN ERCC-8Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000109Cellular Componentnucleotide-excision repair complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006283Biological Processtranscription-coupled nucleotide-excision repairInterproscan
GO:0031464Cellular ComponentCul4A-RING E3 ubiquitin ligase complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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