Detailed information of alvinactis_v1_g415 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:7632355...7675895
NR annotation: XP_020908390.1, alsin [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96Q42Alsin OS=Homo sapiens OX=9606 GN=ALS2 PE=1 SV=2
Q5BIW4Alsin OS=Pan troglodytes OX=9598 GN=ALS2 PE=2 SV=1
Q920R0Alsin OS=Mus musculus OX=10090 GN=Als2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF02204VPS9Vacuolar sorting protein 9 (VPS9) domainFamilyInterproscan
PF13540RCC1_2Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF02493MORNMORN repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR037191Homologous_superfamilyVPS9 domain superfamilyInterproscan
IPR003123DomainVPS9 domainInterproscan
IPR003409RepeatMORN repeatInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR051984FamilyAlsin GEFs and Motor Neuron RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46089ALSIN HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0043087Biological Processregulation of GTPase activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04575ALS2; amyotrophic lateral sclerosis 2 protein-Chromosome and associated proteinsko03036deepkoala

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