Gene detail

Detailed information of alvinactis_v1_g3667 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:13428400...13444137
NR annotation: XP_031557321.1, zinc transporter 5-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g3667

ATGGACGAGTTATCGTACAGCGATAATCTCTTTAATAAACGACAACTCGGGCCGATTGGTTCAACAACGATTACTCCTTATGTTGTTGCCTTATTTATTGCCAAGTTTCTGCATTCCTTTGGGATATTTGTTGCCTATGAACAGCTAAAGATATTCCGCATTACCCAGTTCTTATTTATAGTCAGATTATTTTCGTCAATTATTCTTGTGTTACTGCAAAAACCAATCTCATCTGGAAAGAAAATCACAGCTAATCAGTGGTACAGAATCTGTAGACATGCTGTATTCTCTACTATTATTGCATTGATATGGTTGCAAGGACTAACGCTGTGTGGAGCATTAAGGACAGTGCTTCTGTTTGAACACGGTGAGCTGACTGTACTGGGTGCTCTTGGTGTACTCTGTCATACTGGTGTAGCAGGTCCTTCCAAGGTCAGAGGAGCTGTTCTTTTCTTTCTGGGTTTCATAGCTCTTTTGCTGTTTGATAATGACACACCTCATGACCATGCTGCCCATAATGAAGGAACTGGCCAAAGTAGATGGATGCATTGGTATTACCATATACTGTCTATGCTGGGACTGCCTGACCATCAGGGTGGCCTTATTCTTCTTTTGTTGGGTTTACTATTAAATGTGGCACATGGAAACTTTTCAAGAAAGTTAGCTGTAGAGATTGGAGGTTCAAAGCGTCTAACGGCACTATCAACTAATGTCTCCTGCatactgctcattccaatggctattatatcctactatcatcagGAAGCGACCATTGATTGGATAAGTTCAATCCTCCCAATGTCCCTGGTGGTCTTGGTCGTCTTCATACTGGATTTCTATGTGGAGTCATTCTGTTTATCCAAACTAGAAGGTGCTATGACGAGCAAGGTTGGGTCGATGGCTTCTTTCATATCTGCACTGTTCTTTGCACTGCTATGGGATCAGCCATGGGCATGGTCTATGCATGAATGGCATCACGGCAATACTGCTGGTGTTAAGCATTTATTGTCAGGTGGCACAGTTTTTAGTGCAATATTGTTTATTCTAGCCACTAGACTGCTATGCCGCCCTTCACCTCGTCCAGCTAAAGGCAACCTGATTGGCTACACTACGGGTGGATTACCAATATATAACTTCCACACTCCACAATCCATGTTGTCGACTTTTAGAACGTTTCTACGACAGACTCTTGAGGAGTCAGAATCACGGCAGATCTTTTACTTTCTTTGTTTAAATTTAATGTTCACTGGAGTGGAGTTGCTGTATGGTGTATGGACCAACAGCCTGGGGTTAATATCTGATGGCTTTCACATGATGTTTGACTGCACTGCTCTTGTACTCGGTCTGTGTGCTGCACTCATGTCAAGATGGAAGAGAACAAGAACTTTCTCATACGGGTTTGGTAGAGTTGAGATACTTTCTGGTTTTATCAATGGTTTGTTCCTTGTAGTCATTGCATTCTTTGTGTTCGTGACTGCTCTACAAAGGTTATTTGATCCTCCAAAAGTCAGTACAGAGCGTCTCTTGGTAGTGTCTGTTCTAGGTCTACTTGTTAACTTAGTGGGGATATTTGCATTTCgtcatgctcacgctcatgcacatagtcatggtgggggtggttcccatggtcatggacatagtcacgatcatggtcatcatggtcatgAACATCAATCATCACATCCTGATAGAAGTGTCAACATGGAAGGCGTATTCCTTCATGTCGTGGCTGATACTCTGGGTAGTGTTGGCGTCATAGTGTCATCTCTTCTCATAGAGCACTTTGGTCTGTTCATAGCAGATCCTGTATGTTCGTTATTCATAGCCACCATGATCTTTCTCAGCGTGTTACCACTTCTAAGGGAATCATCTCTAGTTCTGCTACAGACAACGCCTCTGGAGATTGACAAGTCTCTAAGCCATGTTTTAAATAAGGTTCTGTCACTAGATGGTGTACTGTCGTACAGAGATCATCACTTTTGGCAGCATTCAGAGAAGACAACCGTAgggacaatacatgtacaagtagcaccatcggctagtgaacagaagattatacaacagGTGAACTCTCTACTAAAAGAATATGGAGTGAATGATCTGTCTATCCAAGTAGAAAAGGAAGCATTTTTTCATCACATATCTGCACTGTCAGCAGGGTACAAGTCTGTTTTAGCACTAAAACAAGGCTCAGAGATTGGTCAGCCACCTTGTGACACAGATTTAGGTTTTATTAAATCTATTTAG

Transcript

alvinactis_v1_g3667

Protein

Uniprot

Uniprot term	Description
Q28CE7	Proton-coupled zinc antiporter SLC30A5 OS=Xenopus tropicalis OX=8364 GN=slc30a5 PE=2 SV=1
Q5ZLF4	Proton-coupled zinc antiporter SLC30A5 OS=Gallus gallus OX=9031 GN=SLC30A5 PE=2 SV=1
Q8TAD4	Proton-coupled zinc antiporter SLC30A5 OS=Homo sapiens OX=9606 GN=SLC30A5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01545	Cation_efflux	Cation efflux family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027469	Homologous_superfamily	Cation efflux transmembrane domain superfamily	Interproscan
IPR002524	Family	Cation efflux protein	Interproscan
IPR045316	Family	Zinc transporter Msc2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45755	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006812	Biological Process	monoatomic cation transport	Interproscan
GO:0008324	Molecular Function	monoatomic cation transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005385	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan
GO:0006829	Biological Process	zinc ion transport	Interproscan
GO:0006882	Biological Process	intracellular zinc ion homeostasis	Interproscan
GO:0030001	Biological Process	metal ion transport	Interproscan
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0046873	Molecular Function	metal ion transmembrane transporter activity	Interproscan
GO:1904257	Biological Process	zinc ion import into Golgi lumen	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14692	SLC30A5_7, ZNT5_7, MTP, MSC2; solute carrier family 30 (zinc transporter), member 5/7	-	Transporters	ko02000	deepkoala