Detailed information of alvinactis_v1_g3616 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:12646859...12670196
NR annotation: XP_048583836.1, uncharacterized protein LOC5504590 isoform X3 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q0WYX8MAM domain-containing glycosylphosphatidylinositol anchor protein 1 OS=Gallus gallus OX=9031 GN=MDGA1 PE=1 SV=1
P85171MAM domain-containing glycosylphosphatidylinositol anchor protein 1 OS=Rattus norvegicus OX=10116 GN=Mdga1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR000998DomainMAM domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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