| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g31249 | TRANSPOSASE, PUTATIVE-RELATED | chr_17 | 10231380 | 10233368 | + |
| CDS | |||||
| alvinactis_v1_g31249 | |||||
| Transcript |
| alvinactis_v1_g31249 |
| Protein |
| alvinactis_v1_g31249 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF13976 | gag_pre-integrs | GAG-pre-integrase domain | Domain | Interproscan |
| PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR025724 | Domain | GAG-pre-integrase domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42648 | TRANSPOSASE, PUTATIVE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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