Detailed information of alvinactis_v1_g30240 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g30240EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDchr_161558171815646603-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00989PASPAS foldDomainInterproscan
PF08976EF-hand_11EF-hand domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR013767DomainPAS foldInterproscan
IPR015070DomainDJBP, EF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR052603FamilyEF-hand calcium-binding domain-containing protein 6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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