Gene detail

Detailed information of alvinactis_v1_g30140 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_16:14559738...14564806
NR annotation: CAH3103222.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g30140

atgccaagtagatgtgtagtccaaggctgcagtaacaagtctgccccaaaacagggcatttctttacatCTTTCGCCCCTTGACAAGGCACAGTACGCAAAGTGGAGAAAGTTTGTCTTGCTTCACCGCAAAAACTTCAATCCTGAGGATCGCTTTGCAATATGCTCAAAACATTTCGAGGACAGCTGTTTTTCAAGACTACTACATCAGGAAGGATCTCCACGTAGGCTTATTCCAGAAGCAATCCCTACAATTTGGCAATCAACGTTTGTGGATGCTCCAAATAGCGCGAGGGACCGACGGAAGATATTGAAGGACATACTGGCTAAAACGTCGACTGGGAATGATCTCGACCAACCACCAATGCCAATGGCAATGGACCTAACCGGCGTTTTAGAATCTACATGTAGTAACGAGACGACTAAGGACATGGATATAGACGATCCACTGCCAGCACAGTCCGTCGAACCCATTGTTGTGACAGCATTTCCCGCCACTAGCACTGCATGTGAACACAGCCCTCAGGTTGAAATCAATTCTTGCAAGAATTGTGACTACTACAAGGAAGAGATCAGATCTTTGAAAAAAACTGTTAATACCCTTCAGACCAAAGCTAAAAGGTTACAAGACCGATTGGATAAAAAGAACTCGGAGTTAGAAGAGATATCACATAAACAAAATAGAAAATCATTAGGAATACAAACAGATAGCAATGATCTTGAACAGCatccacccacagagtatccacccacagagtatccacccacagagAGCAATGTCGAAGAACAGGAAGATGGAATTGCTGATGACCCAACATGGGCTCCCAATCCCGAAGATAACGACGAAGAAAATCCTAACCTAAGgttggactttgaaggaaagaaccaaagagaagaaccgaaagggattgtctttctttcaaaactgatgttactctttcagtactgtcactattgtttctcaagcaatcccaaagtagctgtgtcccagaatgggacatcactgagcattgtcagtaaatgtgagagatgtggagaaacattcaactggacaagccaaccaatactactcaacaaatttcaggctgggaatttattgctcagttttgccatgctcactgctggtgcttcattttggcgatcatatcaagctaagatgctggagtcactgagaggaaaagaagttataatagcaggagatggacgccataacagtatggggcactcggccaagtttggcacatacaccatctactgttgtactgcagggttgatcttgcatcttgttgttgtgcaggctaatgaagctggcagcagttcagccatggaattcctaggccatcaaaaggcatttgaatttatattggctacaggcatggtgataattgcatttgtgtccgaccgtcatacatcgatcgcaaaatggatgcgagaagaactaccagaccgttgcaaagcactaggaaaacctgtagtacaccatttctttgacctttggcatattgctaaaaaaatacagaaaatccttatcaagttaagcaaggaaaggggaggggaattgattggtagatggcgcaaagcttgtgtccgccactttcactggtctgtcacatcgacacaagatttgttaggtgaagtaaaagtggcaaaattccattcgttcttttcacacatcctcaacaaacatagcaatcttccaaaccaactgtttaatacttgtgcgcatggaatcatcaccagtcccaaggtgtggtttacaaaaggatctgaggcatatgaaaagatgtttgatgctctgacaaatgtacagcttactaaagctataaagaaggcatcttcagtggggcagacaagttgtcttgaggcctatcattcggtcataaaccactttgcacccaaaatgttggcatactcctatcttggtatgtttggaaggacaatattagcagctctacattttaactacaatgtcaaaagagaaccaaaggtagatgacaatgATTATGTAAAAGAAATATACACAACTATGACGACAACACCTCGTGATGAATTGAAAATCATAGAACAAGAATTGGAACAACAGACACCTGAACATATGCACACCATGTTTGAAAGAGAATCAACTGATGATGCAAAGGCAAAGTATATTGCAAGAAAACAAAAAGTAACTGGTATTTACCCACCAACATGTTCAGACGCTGAGGTGCAGAGAATGATAGAAGAGGCTTCCTTATCTGTacaagaaggagttcgacaagaaagagctagacaaggaagaagagcaccaacatgcaaaaagtgtggtgccccaatgagagggcacaaaagaggaagctgtgaaGCAGCAACAAATGAATAG

Transcript

alvinactis_v1_g30140

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31751	SI:CH211-108C17.2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26089	ANKZF1, VMS1; ankyrin repeat and zinc finger domain-containing protein 1	-	Ribosome biogenesis	ko03009	deepkoala