| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g2914 | LAFORIN | chr_2 | 2117383 | 2118339 | + |
| CDS | |||||
| alvinactis_v1_g2914 | |||||
| Transcript |
| alvinactis_v1_g2914 |
| Protein |
| alvinactis_v1_g2914 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00686 | CBM_20 | Starch binding domain | Family | Interproscan |
| PF00782 | DSPc | Dual specificity phosphatase, catalytic domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000340 | Domain | Dual specificity phosphatase, catalytic domain | Interproscan |
| IPR000387 | Domain | Tyrosine-specific protein phosphatases domain | Interproscan |
| IPR002044 | Domain | Carbohydrate binding module family 20 | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR013784 | Homologous_superfamily | Carbohydrate-binding-like fold | Interproscan |
| IPR020422 | Domain | Dual specificity protein phosphatase domain | Interproscan |
| IPR029021 | Homologous_superfamily | Protein-tyrosine phosphatase-like | Interproscan |
| IPR042942 | Family | Laforin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46864 | LAFORIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004725 | Molecular Function | protein tyrosine phosphatase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006470 | Biological Process | protein dephosphorylation | Interproscan |
| GO:0016311 | Biological Process | dephosphorylation | Interproscan |
| GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
| GO:2001070 | Molecular Function | starch binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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